<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31318
Description |
Mediator of RNA polymerase II transcription subunit 37a |
Sequence | MARSFGANSTVVLAIIFFGCLFALSSAIEEATKLGSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLSTNGDTHLGGEDFDHRVMEYFIKLIKKKHQKDISKDNKALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGGAGGESSTEEEDESHDEL |
Length | 669 |
Position | Unknown |
Organism | Arabidopsis thaliana (Mouse-ear cress) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.463 |
Instability index | 31.56 |
Isoelectric point | 5.08 |
Molecular weight | 73628.39 |
Publications | PubMed=11130714
PubMed=27862469
PubMed=14593172
PubMed=8281187
PubMed=11599561
PubMed=11402207
PubMed=17560376
PubMed=17272265
PubMed=19763086
PubMed=20080634
PubMed=21909944
PubMed=22021418
PubMed=23624714
PubMed=24486762
PubMed=26186593
PubMed=26251880
PubMed=31410484
|
Function
Annotated function |
In cooperation with other chaperones, Hsp70s are key
components that facilitate folding of de novo synthesized proteins,
assist translocation of precursor proteins into organelles, and are
responsible for degradation of damaged protein under stress conditions
(Probable). Involved in polar nuclei fusion during female gametophyte
development and is essential for the regulation of endosperm nuclei
proliferation (PubMed:20080634). Involved in sperm nuclear fusion with
central cell polar nuclei at fertilization, which is critical for
normal endosperm nuclear proliferation (PubMed:31410484). Required for
pollen development and pollen tube growth (PubMed:24486762). Possesses
ATPase activity in vitro (PubMed:26186593).
ECO:0000269 PubMed:20080634
ECO:0000269 PubMed:24486762
ECO:0000269 PubMed:26186593
ECO:0000269 PubMed:31410484
ECO:0000305 PubMed:11402207
|
GO - Cellular Component | cell wall GO:0005618 IDA:TAIR
chloroplast GO:0009507 IDA:TAIR
cytoplasm GO:0005737 IBA:GO_Central
cytosol GO:0005829 IDA:TAIR
endoplasmic reticulum GO:0005783 IDA:TAIR
endoplasmic reticulum chaperone complex GO:0034663 IBA:GO_Central
endoplasmic reticulum lumen GO:0005788 IBA:GO_Central
Golgi apparatus GO:0005794 IDA:TAIR
mediator complex GO:0016592 IDA:UniProtKB
membrane GO:0016020 IBA:GO_Central
nucleus GO:0005634 IBA:GO_Central
plasma membrane GO:0005886 IDA:TAIR
plasmodesma GO:0009506 IDA:TAIR
secretory vesicle GO:0099503 HDA:TAIR
vacuolar membrane GO:0005774 IDA:TAIR
vacuole GO:0005773 IDA:TAIR
|
GO - Biological Function | ATP binding GO:0005524 IBA:GO_Central
ATPase activity GO:0016887 IBA:GO_Central
heat shock protein binding GO:0031072 IBA:GO_Central
misfolded protein binding GO:0051787 IBA:GO_Central
protein folding chaperone GO:0044183 IBA:GO_Central
unfolded protein binding GO:0051082 IBA:GO_Central
|
GO - Biological Process | cellular response to unfolded protein GO:0034620 IBA:GO_Central
chaperone cofactor-dependent protein refolding GO:0051085 IBA:GO_Central
endoplasmic reticulum unfolded protein response GO:0030968 IBA:GO_Central
protein refolding GO:0042026 IBA:GO_Central
ubiquitin-dependent ERAD pathway GO:0030433 IMTAIR
|
Interaction
Repeat regions
Repeats |
>MDP31318
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 99.94| 26| 27| 579| 604| 1
---------------------------------------------------------------------------
550- 569 (22.93/ 9.69) .....VKEAEEFAEE.DKKVKEK.IDA
579- 604 (41.89/23.61) NMKNQVNDKDKLADKLEGDEKEK.IEA
608- 633 (35.12/18.64) EALEWL.DENQNSEKEEYDEKLKeVEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.73| 11| 27| 231| 241| 2
---------------------------------------------------------------------------
231- 241 (20.38/13.74) LGGGTFDVSVL
259- 269 (22.35/15.86) LGGEDFDHRVM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 105.01| 27| 27| 87| 113| 3
---------------------------------------------------------------------------
68- 84 (18.85/ 7.43) .....ITPSWVG.FtDSERLIG......E
87- 113 (46.50/28.06) KNQAAVNPERTV.F.DVKRLIGRKFEDKE
116- 142 (39.66/22.96) KDRKLV.PYQIVnK.DGKPYIQVKIKDGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 90.99| 26| 27| 386| 411| 4
---------------------------------------------------------------------------
196- 222 (26.61/14.66) I..AGLNVARII.NePTaAA.IAYGLDKKGG.
386- 410 (38.60/24.76) ...EGKEPNKGV.N.PD.EA.VAYGAAVQGGI
411- 440 (25.78/13.95) LsgEGGDETKDIlL.LD.VApLTLGIETVGGV
---------------------------------------------------------------------------
|