<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31314
Description |
Mediator of RNA polymerase II transcription subunit 33A |
Sequence | MVVPGRRTVWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVWKFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQKVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWLVKSQDMEIDAPERYNEKTGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRASKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDFGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVMEKLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVGKSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEVPCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMVPQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVGDVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSEVARAASCQPVFVDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKVRGSQTLNPVNSGTSSSSGAASEDSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYFSAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVFSASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAPGILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLATAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGPSDLVAELRGHALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYISGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFIIHLRS |
Length | 1309 |
Position | Tail |
Organism | Arabidopsis thaliana (Mouse-ear cress) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.157 |
Instability index | 43.55 |
Isoelectric point | 6.70 |
Molecular weight | 143092.69 |
Publications | PubMed=10819329
PubMed=27862469
PubMed=17560376
PubMed=18430946
PubMed=22021418
PubMed=22167189
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. The Mediator complex, having a compact
conformation in its free form, is recruited to promoters by direct
interactions with regulatory proteins and serves for the assembly of a
functional preinitiation complex with RNA polymerase II and the general
transcription factors. Involved in the repression of phenylpropanoid
biosynthesis. May compete with MED33B for common binding partners or
for occupancy in Mediator.
ECO:0000269 PubMed:22167189
|
GO - Cellular Component | mediator complex GO:0016592 IDA:UniProtKB
|
GO - Biological Function | |
GO - Biological Process | phenylpropanoid metabolic process GO:0009698 IEA:UniProtKB-KW
regulation of phenylpropanoid metabolic process GO:2000762 IMTAIR
|
Interaction
Repeat regions
Repeats |
>MDP31314
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 404.80| 132| 161| 978| 1127| 1
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978- 1127 (209.11/187.30) LAAGCPW..PCMPIVASLWTQKAKRWFdflvFSASRTVFLHNQDAVIQLLRN.........CFSATLGLNAAPMSNDGGVGALLG.H.GF.GSHFYGGISpVAPGILYLRMYraLRDTVSVSEEILSLLIHSVEDiaqnrlskeklEKLKTVKNGSR.YGQSSLA
1139- 1285 (195.68/136.37) LSASLVWltGGLGVVHVLIKETIPSWF....LSTDKSDREQGPSDLVAELRGhalayfvvlCGALTWGVDSRSSASKRRRQAILGsHlEFiASALDGKIS.VGCETATWRTY..ISGLVSLMVSCLPLWVTEIDT...........EVLKSLSNGLRkWGKDELA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 97.41| 29| 346| 521| 590| 2
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59- 89 (49.40/14.24) CWDNNVPivWKFLERAMALKLVS.PLVVLALL
531- 560 (48.01/67.34) CWSSFVK..GAPLNAAMVNTLVSvPASSLAEL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 190.57| 43| 70| 747| 789| 3
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679- 717 (48.00/26.35) .....AISAYSVFSNAFTlLLKLWRFNHPP.IEHGVGDVpTVG..SQ
747- 789 (77.12/46.84) SEVARAASCQPVFVDSFP.KLKVWYRQHQRCIAATLSGL.THG..SP
819- 862 (65.45/38.62) SSSSGAASEDSNIRPEFP.AWDI.LKAVPYVVDAALTAC.THGrlSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 171.77| 59| 161| 441| 512| 5
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441- 512 (91.55/93.23) LLAPPkcVVSAANKAATKAILFLSGGN...VGKSCFDVIN...MKDM.P.VNCSgnmrhlIVEACiarniLDMSAY....SW..P.G
604- 677 (80.21/52.36) LLSPP..VPADYSRAENHLIGYACMLNvviVGIGSVDSIQifsLHGMvPqLACS......LMPIC.....EEFGSYtpsvSWtlPsG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.04| 23| 828| 33| 57| 6
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33- 57 (31.76/25.62) QLSSNLKFFAVELPSTeLAeVIVSY
864- 886 (39.28/22.25) QLATGLKDLADFLPAS.LA.TIVSY
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