<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31261

Description U-box domain-containing protein 34
SequenceMAWRDQQTRPLRAADARRRRVGSGPGPEQWRSLKASCVATEKPDEKAAPGLEFADDEDYVKGGGGELLYVQMQATKAMESQSKIASKGSPLSPDEHRLTSPPSLHQPASTIVVAIDRDRNSQLAMKWVVDHLLSGASHIILLHVAAHPPAANPYCLQVQESEVILEEADVPKAIIDYITANKIQSIALGASNRNAFTKKWKNPDVPSSLMKGAPDYCNIYVVAKGKPVNVRLAKCGVPADDSDFLLATYSRRSSRSQLPPVLPDFLSSSRRSIDRPELTTRPPFRERPLQASATKQPLLLSGRIDSTTLRSNSHDPSSLDPDFAQAVHFSSMDFGENMDALPLSPRESGSPLSALSWYVCKAQREVEVEMRRLKLELKQTMDMYNAACKEAINAKQRAKEMHLLKMEEARRLEEARQSEEAALALAEMEKVKCRAAMEAAEAAQRLADLEAQRRRNAEVRARREADEKVRALDAIANHDFRYRKYSIDEIEIATEGFSDSLKIGEGGYGPVYSASLDHTPVAVKVLRPDAQQGRKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLYRRGGTPTLPWSQRFRISAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPAVADSVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIYSLGVLLLQVITARPPMGLTHHVEKAIESGTFAQMLDITVKDWPVEDALGFAKLSLKCTEMRRRDRPDLGTVILPELNRLRNLGIAYDQARATVPAGDSSSHGQERVSSPMADAGLWRTAES
Length805
PositionTail
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.428
Instability index55.25
Isoelectric point7.58
Molecular weight89320.70
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31261
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      65.08|      20|      20|     417|     436|       1
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  399-  424 (16.04/ 6.24)	.KEMHLLKMEEArrleearQSEEAALA
  425-  445 (27.38/15.87)	LAEMEKVKCRAA......mEAAEAAQR
  446-  471 (21.66/11.01)	LADLEAQRRRNA.evrarrEADEKVRA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.26|      27|      49|     552|     580|       2
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  552-  580 (44.20/35.93)	MVLLLGACPEYgcLVYEYMENGS.LEDRLY
  604-  631 (44.06/27.69)	LLFLHQTKPEP..LVHRDLKPANiLLDRNY
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.52|      15|      22|     238|     259|       3
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  242-  258 (17.44/21.26)	SDFLlATySRRS.SRSQL
  263-  278 (25.08/11.47)	PDFL.SS.SRRSiDRPEL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.74|      17|      22|     137|     154|       4
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  137-  154 (28.05/22.10)	SHIIlLHVAAHPPAANPY
  161-  177 (28.69/17.54)	SEVI.LEEADVPKAIIDY
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.25|      21|      37|       5|      41|       5
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    5-   26 (33.76/36.65)	DQQTRP.LRAADARRRrVGSGPG
   44-   65 (33.49/ 8.20)	DEKAAPgLEFADDEDY.VKGGGG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.26|      20|      22|     194|     214|       6
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  194-  214 (33.12/23.76)	NAFTKKWKNPdVPSSLMK.GAP
  218-  238 (29.14/15.79)	NIYVVAKGKP.VNVRLAKcGVP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.33|      36|     251|      90|     130|       7
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   90-  130 (56.47/45.54)	PLSPDEHrlTSPPSlhqPASTIVVAIDRD.....RNSQLAMKWVVD
  342-  382 (59.85/34.51)	PLSPRES..GSPLS...ALSWYVCKAQREvevemRRLKLELKQTMD
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.06|      15|     253|      27|      43|       8
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   27-   43 (24.13/21.00)	PEQWRSLKAScvATEKP
  283-  297 (28.93/17.09)	PFRERPLQAS..ATKQP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.23|      38|      59|     639|     680|       9
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  639-  680 (58.51/46.71)	GLARLVPPAVADSVTQYRLTATAGTFcyidPEYQQTG..KLGVK
  701-  740 (59.72/36.69)	GLTHHVEKAIESGTFAQMLDITVKDW....PVEDALGfaKLSLK
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31261 with Med32 domain of Kingdom Viridiplantae
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