<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31255

Description Uncharacterized protein
SequenceMVEGMSCPAIAAEYVEKIVRWRSFCSTELSGQKLAGVPPELALVVFHTHGPYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSPGSSQNHQNRELQKHCLLVAASNPYPLPTPVYRPSVQSSDHKKSNEATKESCLADAEAVAVSFAQSSVSLSVVSPKQLPTLKAIYNAEPTTIPPMVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNMISSGMTSTPAVISSISGTVQPIGAQQLVQNTALGSFGSNTSTVSGNSNIAVSSSLANIQSNMAMGQSVPSMAQGGLMAGPQSGQGGIGTNQNMINNLGTTAISSTPTMMPTPGMVQQTGVNALSANNSSAMNMPLAQHPNGQQPSKYVKIWEEYNSGHDFLLFIFQGTLSGQRQGQPVFICKLEGYRSGTASDTQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGVSTQQPQMQPQQQQQQLQQQQHQIQQQQQQLQQLQQQQLQQHQMQMQPQGQQLQQQQQMQQMQQQQQQMQQMQHQQQQQQQQIQQQQQMQQQQQQQQQQQMQQMQQQQQQQPQQLQQQPQMVGTGMGQQQFMQGHGRAVQMMQGKIAPQGPGNMSGGGYLS
Length708
PositionUnknown
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.475
Instability index59.60
Isoelectric point8.13
Molecular weight76847.89
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:EnsemblPlants

GO - Biological Function
DNA binding	GO:0003677	IEA:EnsemblPlants

GO - Biological Process
defense response to fungus	GO:0050832	IEA:EnsemblPlants
jasmonic acid mediated signaling pathway	GO:0009867	IEA:EnsemblPlants
positive regulation of defense response	GO:0031349	IEA:EnsemblPlants
positive regulation of flower development	GO:0009911	IEA:EnsemblPlants
positive regulation of transcription, DNA-templated	GO:0045893	IEA:EnsemblPlants
red, far-red light phototransduction	GO:0009585	IEA:EnsemblPlants
response to far red light	GO:0010218	IEA:EnsemblPlants
response to red light	GO:0010114	IEA:EnsemblPlants
trichome branching	GO:0010091	IEA:EnsemblPlants
trichome papilla formation	GO:1905499	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31255
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     222.60|      29|      29|     598|     626|       1
---------------------------------------------------------------------------
  551-  574 (47.97/ 8.76)	....QQPQM..QP.QQQQQQLQQQQHQIQQQ
  576-  596 (44.55/ 7.69)	QQLQQLQQ...QQLQQHQMQM.......QPQ
  598-  626 (68.61/15.22)	QQLQQQQQM..QQMQQQQQQMQQMQHQQQQQ
  628-  658 (61.47/12.99)	QQIQQQQQMqqQQQQQQQQQMQQMQQQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     286.68|      44|      48|     258|     301|       2
---------------------------------------------------------------------------
  110-  148 (32.44/ 9.78)	..........................................QNREL..QKHCLLVAAS..NPYPLPTPVyrpS.VQ.S...SDH.KKS.NE
  149-  217 (34.97/11.12)	AT.............KESCLadaeavavsfaqssvslsvvspKQLPT..LKAIYNAEPTT.IPPMVSAPA...F.SH.MtpiSNV.ASQ.GV
  218-  257 (26.17/ 6.45)	SAmqtsspsiisqetNVA........................NEILQ..EHKPLV.N...........PI...Q.........QQ.VRP.GG
  258-  301 (76.53/33.15)	PA.............NVSIL......................NNLSQ..HRHSLTAATSM.GPNMGATPI...Q.VH.M...SNM.ISS.GM
  305-  351 (37.33/12.36)	PA.............VISSI......................SGTVQpiGAQQLVQNTAL.G.SFGSNTS...T.VSgN...SNIaVSS.SL
  352-  394 (37.80/12.62)	.A.............NIQSN......................MAMGQ..SVPSMAQGGLMaGPQSGQGGI...G.TN.....QNM.INNlG.
  416-  453 (41.44/14.55)	VN.............ALSA.......................NNSS......AMNMPLAQ.HPN.GQQPS...KyVK.I...WEE.YNS.G.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.65|      30|      41|     455|     486|       4
---------------------------------------------------------------------------
  455-  486 (50.64/32.84)	DFLLF..IFQGTLSGQRQGQPvfICKLEGYRSGT
  497-  528 (49.00/25.91)	DFLVFrtLNQHGFLGQLQEKK..LCAVIQLPSQT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31255 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PSMAQGGLMAGPQSGQGGIGTNQNMINNLGTTAISSTPTMMPTPGMVQQTGVNAL
2) QQLQQQPQMVGTGMGQQQFMQGHGRAVQMMQGKIAPQGPGNMSGGGYLS
365
660
419
708










Molecular Recognition Features






MoRF SequenceStartStop




NANANA