<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31244

Description Heat shock cognate 70 kDa protein 1
SequenceMDRLRPRSTTAIRRPPRPQRASGEKNGPPPLAPHGNGPADHAGSDKGKDGEGMEERGVGDSHVACEEGGEQANRSNQCERRRARCWRRWWEEEDSSASAGGRDDFSTVNYNKGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTSDMKLWPFKVIAGPGDKPMIVVQYKGEEKEFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNTIKDDKIASKLAADDKKKIEDAIDQAIQWLDGNQLAEADEFDDKMKELEGLCNPIIAKMYQGAGADMAGAMDEDDAPPAAGGAGPKIEEVD
Length736
PositionUnknown
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.583
Instability index38.42
Isoelectric point5.17
Molecular weight80910.06
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31244
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.62|      14|      26|     659|     672|       2
---------------------------------------------------------------------------
  659-  672 (23.46/12.95)	DDK.KKIEDAIDQAI
  687-  701 (21.16/11.06)	DDKmKELEGLCNPII
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     130.53|      46|     279|     276|     354|       4
---------------------------------------------------------------------------
  202-  259 (58.52/53.27)	EEKEFaaeEISSMVlikmreiAEAYLGS.TIKNAVVTvpAYFNDSQRQATKD.AGVIAGL
  307-  354 (72.00/44.41)	EEGIF...EVKSTA.......GDTHLGGeDFDNRMVN..HFVQEFKRKNKKDiSGNPRAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.82|      19|      20|     615|     633|       5
---------------------------------------------------------------------------
  615-  633 (30.04/18.97)	EAEKYKSEDEEHKKKVESK
  637-  655 (31.78/20.46)	ENYAYNMRNTIKDDKIASK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31244 with Med37 domain of Kingdom Viridiplantae
Unable to open file!