<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31235

Description Uncharacterized protein
SequenceMTETHLLHILRRSLSVKPHNNIRCSLCHRIRQLIDDNLNLSKIFGFSACEPGVFIVEFVLCILWQLVDTALDDESLLELTPEKKAQWPTRPQDISAFEVSFSEQKPEKIEKLQRMNSVITIELIGHLLHDKENSVGTIHLSVTIACGKLIHLTSFDDVLGLVKALQAVNRSSWHDAFMALWIASVRLVQREREPIEGPVPHLETRLCMLLSIATLAVADIIEEADSRCGETDLSSHWKQETATDDLRKELMLSLQALGDYESLLVPPPCIISAANQAASKAAMLVSGINSSSGYMESINETGNMRHLIVESCISRNLLDTSAYYWPGYINGHVNSMSHAIPSQLAGWAAFMKGTPLTQSLVSVLVSSPASSNKSLNEAHKLDGSLAELEKLFEVAVNGSDDDKVSAATVLCGATLLRGWNFQEHTVRLVVKLLSHSDPSDYSGRESQLIKHGPMLNVILTGISPVDYAPIFSFHGLVPELATVLMAICEVFGCLSPSVSWTVGAGEEISAHTVFSNAFILLLRLWKFNHPPLEYCIMGDGAPVGSQLTPEYLLLLRNSQVLCANSSSKSRSSQKQLPVTSSRSSQNPIFMDSFPKLKLWYRQHQACLASPLSGLAHGTPVHNIVDSLLNLMFRKANKGSTSIGSVSGSSSISNSSGPGDDGSHLWPQLPAWEILEAVPFVVDAALTACSHGRLFPRELATGLKDLADFLPASTATIVSYFSAEVTRGVWKPAFMNGTDWPSPAANLSMVEEHIKKIVAATGVDVPRLATGGTTLGRLPLPLAAFVSLTITYKLDKASERFLNLAGPALENLAASCPWPSMAIVAALWTQKVKRWSDFLVFSASRTVFHHNNDAVVQLLRSCFTSILGMSSTSLCCCGGVASLLGHGFGSHCSGGLSPVAPGILYLRIFRCIKDCSILAEDILSLLMLSVKDIAETTVSRHGSDKLKRTKYAMGHGKISLATAMTQVKVAASLGATLVWLSGGTTLVQSLFQEMLPSWFLSAQDLDRGGASGGTVYKLGGHALAYFAVYCGMFAWGIDPTPVSRRRERVMRSHLEFLASALDGKISLGCNMSLWQAYVSGFLELVVDRAPCLLHEVDLKVLKKLSIGLRQWKEKELAVAILCRGGPEAMGVAAELILDSEW
Length1140
PositionTail
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.151
Instability index43.20
Isoelectric point6.48
Molecular weight123917.67
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31235
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     550.52|     221|     263|      50|     311|       1
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   50-  238 (202.61/173.08)	.....................................................................................EPGVFIVEFVLCILWQLVDTALDD.........ESLLELTPEKKAQWPT....RP..QDISAFEVSFSEQKPEKIEKLQRMNSVITiELiGHLLHDKENSVGTIHLS.VTIACG.KLIHLTSFDD..VLGLVKALQAVNRSSWhdafmalwiasvrlVQREREPIE.GPvphletrlcMLLSIAT........................LAVADIIEeadsrCGETDLSshWK
  239-  501 (294.97/185.17)	QETATDDLRKELMLSLQALGDYESllvpPP...CIISAANQAASKAA....MLVSgiNSSSGYMESINET.GNMRHLI.............VE..SCISRNLLDTSAYYwpgyinghvNSMSHAIPSQLAGWAAfmkgTPltQSLVSVLVSSPASSNKSLNEAHKLDGSLA.EL.EKLFEVAVNGSDDDKVSaATVLCGaTLLRGWNFQEhtVRLVVKLLSHSDPSDY..............SGRESQLIKhGP.........MLNVILTgispvdyapifsfhglvpelatvlMAICEVFG.....CLSPSVS..WT
  506-  599 (52.94/20.55)	EEISAHTVFSNAFILLLRLWKFNH....PPleyCIMGDGAPVGSQLTpeylLLLR..NSQVLCANSSSKSrSSQKQLPvtssrssQNPIFMDSFPKLKLW..........................................................................................................................................................................................................................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     490.03|     162|     247|     604|     838|       2
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  604-  822 (233.33/233.07)	QACLASPLSGLAHGTPVHNIVDSLLNLMFrkankGSTSIGsvsGSSSISnssgPGDDGSHLWP.....QLPAWEILEAVPFVV.DAALTACS.HG..RLFPRELATGLKDLadflpaSTATIVSYFsaevtrgvwkpafmngtdwpspaanlsmveehikKIVAATGVDVPRLaTGGTT....LGRLPLPlAAFVSltiTYKLDK..AS.ERFLNLAGPALENLAASCPWPSMAI
  859- 1036 (256.70/131.44)	RSCFTSILGMSSTSLCCCGGVASLLGHGF.....GSHCSG...GLSPVA....PGILYLRIFRcikdcSILAEDILSLLMLSVkDIAETTVSrHGsdKLKRTKYAMGHGKI......SLATAMTQV..................................KVAASLGATLVWL.SGGTTlvqsLFQEMLP.SWFLS...AQDLDRggASgGTVYKLGGHALAYFAVYCGMFAWGI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31235 with Med33 domain of Kingdom Viridiplantae
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