<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31225

Description Uncharacterized protein
SequenceMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNVTSSSLSLLAGPNRDNCSYMVTLAPRITKSIDAALQLSKTYGVAGTDFGHVVILFVLIVITKLIDSVLEDCGISSGTTLEQESVYPNEGPQPMDMDVKGVSAVKQNEQREQLRRKNTVMALEVLHMMAADRKIQAFLRLICLNIVGTSIIINHSNYVKVRPDKFSALSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPPSSLVNVANAAASKAAIFRANCKVGGNPGMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLVLMHNSRIEFPNSSATSTNSGSSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKITKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALHSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQGCFSSFLRSSPSSGSDITASRGVGALMGESITGHQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVIDCSHKLANGWSSNGPPHSGPPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASTLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAAGLRSWQEHDLALSLLERGGPKAISAVVETLLQ
Length1266
PositionTail
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.149
Instability index46.75
Isoelectric point8.13
Molecular weight137374.69
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31225
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     202.48|      64|     229|     709|     807|       1
---------------------------------------------------------------------------
  638-  707 (95.08/56.32)	DETSVYSVFSCAFlCLLRLWkfYKPPQEyCLA....GRGGSVRLELTLDYLVLMHNSRIefPNSSATSTNSGSS
  712-  779 (107.40/102.95)	DEVPTQPIYIDSF.PKLRAW..YIQNQA.CIAstlsGLGNTNPVHQVANKILSMICRKI..TKSGVVSGNLSSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     190.54|      58|      77|     984|    1045|       2
---------------------------------------------------------------------------
  984- 1045 (91.12/70.08)	DAVAQLIQGCFSSFLRSS...PSSGSDITASRgVgALMGESITGHQGlhFPMAPGFIYLRTCRTF
 1061- 1121 (99.43/60.56)	DCSHKLANGWSSNGPPHSgppPLSGAASMASQ.V.AMLGAGLLCVAG..GPLLVQVLYEETLPTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.69|      16|     363|     112|     127|       5
---------------------------------------------------------------------------
  112-  127 (29.48/20.31)	GISSGTTLEQESVYPN
  477-  492 (32.21/22.97)	GHSKDTSLPQESPWVN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     123.92|      39|     339|     499|     537|       7
---------------------------------------------------------------------------
  499-  537 (62.93/32.67)	LSDPLKNALIATPASSVAELDK.LYH.IALNGSEQEKSAAA
  838-  878 (60.99/31.47)	LVDFLPASLAAIVSYFSAEITRgIWKaVPMNGTEWPSPGAA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31225 with Med33 domain of Kingdom Viridiplantae
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