<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31215

Description Heat shock cognate 70 kDa protein 1
SequenceMAPTKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDARVVDPSLGAAKYVEVLAVDPSLGASSSASADLPNAKRLIGRRFADAPVQSDIKMWPYKVIPGPADKPMIVVQYKGEDKQFSAEEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRSLRRLRTSCERAKRTLSSTAQTTIEIDSLFEGVDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTIHDVVLVGGSTRIPRVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLITRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDDIEKMVQDAEKYKSEDEEHKKKVDAKNSLENYAYNMRNTIQDEKIASKLPADDKKKIEDAVDAAIQWLDANQLGEVDEFEDKMKELEGLCNPIIAKMYQGAGADMPGGMDEDAPAASGGAGPKIEEQGRNCARSGSGETPRESGDGLDAAALVVGDLGAPYLEGKLEGGGLGKKRIWGQERAREEDHQRLSLLGMVCIGFVAAI
Length759
PositionUnknown
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.356
Instability index34.16
Isoelectric point5.11
Molecular weight82523.57
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31215
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.14|      13|      15|     671|     683|       2
---------------------------------------------------------------------------
  671-  683 (23.78/12.53)	ASGGAGPKIEEQG
  687-  699 (21.36/10.55)	ARSGSGETPRESG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.91|      49|     227|     217|     271|       4
---------------------------------------------------------------------------
  220-  268 (81.28/60.80)	AIAYGLDKKATSV.GEKNVLIFD.LGGGTFDVSL.LTIEEGIFEVKATAGDT
  410-  461 (66.63/34.23)	AVAYGAAVQAAILsGEGNEKVQDlLLLDVTPLSLgLETAGGVMTVLITRNTT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.26|      17|      26|     570|     586|       5
---------------------------------------------------------------------------
  570-  586 (27.84/17.89)	EDEEHKKKV..DAKNSLEN
  596-  614 (22.43/13.04)	QDEKIASKLpaDDKKKIED
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.05|      14|      30|     621|     636|       7
---------------------------------------------------------------------------
  621-  636 (21.59/16.55)	QWLDANQLGEVDefED
  654-  667 (27.45/14.32)	QGAGADMPGGMD..ED
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.16|      17|     195|     350|     371|      10
---------------------------------------------------------------------------
  329-  347 (23.01/10.04)	LF....EGVDfySTITRARFEEL
  351-  371 (24.15/21.75)	LFrkcmEPVE..KCLRDAKMDKS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31215 with Med37 domain of Kingdom Viridiplantae
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