<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31211

Description U-box domain-containing protein 57
SequenceMVVVAHVHVPAQTIPLVSHRLIANLIWSLMALTGSGKQVPRKQAESRPGERLQAARKIKCEKLVIESEDVVKGITELVSLHGASKLVMGAAADKHFPRNPSKMLVPRSKTALEVMHKAHPSCKIWFVCREHLISIREDGTLRSPIPTPAIVPARRSPIPASSIVSTRRNRYASSNNAVDSLIQRSMSEKVSPLWLPCRSAIRRTLSILSMEHVSVGSWDSNPRDSVPSSCCEEAPSDSSSSFELPIDDVFVIHHNIAPCHDDQAKKTEDVPKLKEDIAKVQEDMPLSKEEVEALKRERDDAIRKLSEAGEAKGELEQRVIDLEERTSLLDSQLRLAEETRTTWPGLDFAWCSEFSLSELRQATRNFSDATKVGDGVYRGVLRNTTVAIKMLHSHSSSQFQQEVGVVSRVRHPNLVTLMGCCPEASALVFEFLPNGSLEDRLARRDDTPPLAWQGRTRIIGEVCSALVFLHSCEPRPVTHGDLNPANILLDANLVSKLGDYGASRLPTMTDPGSSPCTDPELLITGELTADSDVYSFGVVVLRLVTGQPALGIARKVEEALEKGEMEALVDRSAGEWPFPQAEKLMLLGLQCAELSSRKRPARMSQVWRVVEPLAKAASMPVAPESLVHSFGESHMPSYFICPISQEVMRNPHTAADGYTYEAEAIKGWLDSGHETSPMTKMPLAHRHVTPSYALRSAIQNYMQQHQQKMPPRSVRST
Length717
PositionTail
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.303
Instability index57.29
Isoelectric point6.79
Molecular weight79277.84
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31211
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.91|      15|      15|     279|     293|       1
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  279-  293 (25.05/14.87)	KVQEDMPLSK..EEVEA
  295-  311 (19.86/10.41)	KRERDDAIRKlsEAGEA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     135.06|      41|      43|     148|     189|       2
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  148-  189 (64.64/43.10)	PAIVPARRSPIPASSIVSTRRNRYAS.SNNAVDSlIQRSMSEK
  192-  233 (70.42/43.00)	PLWLPCRSAIRRTLSILSMEHVSVGSwDSNPRDS.VPSSCCEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     249.67|      81|     237|     345|     451|       3
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  345-  435 (115.49/129.90)	GLDfawCSEFSlSELRQAtrNFSDATKVGDGVYRGVlrNTTVAIK.MLHSHSSSQFQQE.VGVVSR..VRHPNLVTlMGCCPEASAlVFEFLPNG
  588-  672 (134.17/83.19)	GLQ...CAELS.SRKRPA..RMSQVWRVVEPLAKAA..SMPVAPEsLVHSFGESHMPSYfICPISQevMRNPHTAA.DGYTYEAEA.IKGWLDSG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31211 with Med32 domain of Kingdom Viridiplantae
Unable to open file!