Description | Putative mediator of rna polymerase ii transcription subunit 22 protein |
Sequence | MASQKETNTTGTNSNDNGEGPRQKAQSGPPPTSVPLRKRTASITNADIFEKLTGTREGAPPDMWTTEEKRRLDEEQEQQDLPQAEDGSRSGSQQQQQQQDDKENGKENEEETANDEPSDILDRHNKAMATILSRFLNMVNAATDPPPQGAVIEHASLNRLAMRTETAALVNEIQGLYVLNREIKGLWLQGPLRKPGEGSAPQQANNAPQPQPQPQPQQAAGKMASETKAKMERSLEILKKLEELHVEEQVQKARAAVVAANGDGEKKGKGKEKEGEGEGEDEGDGEKKNGKDEVMGGNK |
Length | 299 |
Position | Head |
Organism | Eutypa lata (strain UCR-EL1) (Grapevine dieback disease fungus) (Eutypa armeniacae) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Xylariomycetidae> Xylariales> Diatrypaceae> Eutypa. |
Aromaticity | 0.02 |
Grand average of hydropathy | -1.234 |
Instability index | 58.55 |
Isoelectric point | 4.97 |
Molecular weight | 32616.42 |
Publications | PubMed=23723393 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP31188 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 45.15| 14| 16| 67| 80| 1 --------------------------------------------------------------------------- 67- 80 (23.10/12.07) EEKRRLDEEQEQQD 85- 98 (22.04/11.17) EDGSRSGSQQQQQQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 81.45| 23| 176| 18| 41| 2 --------------------------------------------------------------------------- 18- 41 (40.62/19.72) GEG..PrQKAQSGPPPTSVPLRKRTA 196- 220 (40.83/16.38) GEGsaP.QQANNAPQPQPQPQPQQAA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 85.70| 26| 160| 100| 126| 3 --------------------------------------------------------------------------- 100- 126 (40.91/22.82) DDKENGKENEEEtANDEPSDILDRHNK 263- 288 (44.79/21.43) DGEKKGKGKEKE.GEGEGEDEGDGEKK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) KKGKGKEKEGEGEGED 2) KKNGKDEVMGGN 3) SVPLRKRTASITNADIFEKLTGTRE | 266 287 33 | 281 298 57 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab