Description | Uncharacterized protein |
Sequence | MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQSASQQFQPVGQGIPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQALPMQYMQTRPITSAPSQSQQPALPFNNQMPGLAGGGMPYSSSYIFAPPSYAQPQNNVSSSSQFQPISQVQAHVSVTGQPWVSSGNQGAAVPTPVPQSGQQPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRYYFNRRTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLAREQAQRELAQGTRSEMNLTSHAPPAVASAETPMGSSSVGPSTSSALPGMVSSPVAVIPVSSFSNPSPIAPTGSSVASGAQSSITGGVGIQPPVVTVTPPPASVSGSTGVPPTLVNAITKSVSTFENVTSQDIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYASKQEAKNAFKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLENEERRMRQKKAREEFSKMLEESKELMSATRWSKAVSMFENDERFKAVERARDREDLYESYIVELERKEKEKAAEDHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTYWRDYCMKVKDLSSYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLTFEEFKVAILEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEITASSNWEDCKHLFEETQEYRSIGEENFSREVFEEYITNLQEKAKEKERKREEEKAKKEREREEKEKRKDKERKEKEREREKEKGKERSKKDETDSENVDITDSHGHKEDKKREKDKDRKHRKRHQSSMDDVGSDKEEKEESKKRRHSSDRKRSRKHTPESDSESRHRRHKREHQDGSRRNGGYGELEDGEVGEDGEIQ |
Length | 1031 |
Position | Unknown |
Organism | Prunus persica (Peach) (Amygdalus persica) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus. |
Aromaticity | 0.07 |
Grand average of hydropathy | -1.107 |
Instability index | 61.44 |
Isoelectric point | 6.29 |
Molecular weight | 117202.58 |
Publications | PubMed=23525075 |
Annotated function |
|
GO - Cellular Component | cytosol GO:0005829 IEA:EnsemblPlants mediator complex GO:0016592 IEA:EnsemblPlants U1 snRNP GO:0005685 IBA:GO_Central U2-type prespliceosome GO:0071004 IBA:GO_Central |
GO - Biological Function | RNA binding GO:0003723 IBA:GO_Central |
GO - Biological Process | mRNA cis splicing, via spliceosome GO:0045292 IEA:InterPro mRNA splicing, via spliceosome GO:0000398 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP31144 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 364.99| 65| 65| 881| 945| 1 --------------------------------------------------------------------------- 513- 572 (61.31/24.47) .....KT.LGERKQAFN...EylGQR..K........................................KLENEERR.....MRQKKAREEFSK............ML..EESKELMSAT...RWSK.....AVSMF...............E 573- 660 (58.17/22.87) NDERFKAvERARDREDL...Y..ESYivE........................................LERKEKEK.....AAEDHKQNIAEY............RK..FLESCDFIKVN.SQWRKvqdrlEDDERclrlekldrllifqdY 661- 740 (48.07/17.71) IRDLEKE.EEEQKKIQK...E..QLR..R........................................VERKNRDEfrklmEEHVADGTLTAK..tywrdycmkvKD..LSSYEAV.ASN.TSGSTpkelfED................... 742- 853 (35.75/11.43) ..AEELE.KQ..YHEDK...A..RIK..DamklgkvtlastltfeefkvailedigfpsisdinfklvyEELLERAK.....EKEEKEAKKRQRlgddfnkllhtfKE..ITASSNWE..DcKHLFE.....ETQEY...............R 882- 944 (92.96/40.63) KREEEKA.KKEREREEK...E..KRK..D........................................KERKEKER.....EREKEKGKERSK............KD..ETDSENVDITD.SHGHK.....EDKK................. 945- 1012 (68.73/28.26) .REKDKD.RKHRKRHQSsmdD..VGS..D........................................KEEKEESK.....KRRHSSDRKRSR............KHtpESDSESRHRRH.KREHQ.....DGSRR................ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 248.07| 40| 40| 222| 261| 2 --------------------------------------------------------------------------- 135- 171 (30.46/12.13) ....G..GGMPY.......S..........SSYiFAPPSY...AQPQNNVS......................SssqfqpiSQV.Q 172- 226 (42.38/19.74) AHVSV..TGQPWV.................SSG.NQGAAV...PTPVPQSGqqpssttftdsavnvpsqtqqsS.......SDW.Q 227- 267 (64.28/33.71) EHTSG..DGRRYYFNRRTKQ..........SSW.EKPLEL...MTPMERAD.....................aS.......TVW.K 268- 302 (47.06/22.73) EYTSS..DGKKYYYNKVTRE..........SKW.TIPEEL...KLAREQAQ................................... 337- 375 (26.06/ 9.32) PSTSSalPGM..........vsspvavipvSSF.SNP.......SPIAPTG......................S.......SVAsG 376- 407 (37.83/16.83) AQSSI..TG.....................GVG.IQPPVVtvtPPPASVSG......................S.......TGV.P --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 54.02| 14| 17| 24| 37| 3 --------------------------------------------------------------------------- 14- 34 (17.85/ 7.50) RpPPvaslgpQSFGSSPSLQY 35- 54 (17.96/ 7.60) R.PVvptqqgQQFIQSASQQF 110- 126 (18.21/ 7.82) R.PI.tsapsQS..QQPALPF --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 56.78| 17| 34| 55| 72| 4 --------------------------------------------------------------------------- 55- 72 (29.22/17.95) QPVgQGIP..SSNVG..MPASQ 80- 100 (27.55/12.20) QPM.QPYPlrPSQPGhaTPSSQ --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GELED 2) LQYRPVV 3) RHRRHKREHQ | 1017 32 998 | 1021 38 1007 |
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