<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31133

Description Uncharacterized protein
SequenceMAHGGEIVEEPVARMIEDMIYVAVAKDVKDSKSTLVWAVHNSGGKKICLAHVHQPSQKIPCMGGWFPASSLKDEEVRAYREIERQNMNKILEDYFRICRQMGVRAEKLHIEMDCIEKGIVELISQHGIRKLVMGAAADKYHSRKMMDLKSKKAIYVRQQAPVSCHIQFICKGHLIYTREGNSDGVDTDVPLLQPSPNSDPEQSPHHFRSRSAVTLGQNNRAKLTNPAQDLYRRVRSANMEKYGGSITEATSSDGTEGLSTPSRFEAGGSPDDWDRVSRRSVSGYSSCSSALGDLALVQYDRIEGSENGSTESHALSHFKELNHSSPPSVLDGNIDDSLYDHLEQAMAEAENAKREAFREGIRRGKAEKDAIDAIRRAKASELLYNEELRQRKEIEEALAREREELEKMKKQRDEVMEELRAALDHKSLLESQIAESDQMAVNLEQKIISAVELLQNYKKERDELHVERDNALREAEELRRKQGEASSSHLPQFFTEFSFTEIEEATRNFDPSLKIGEGGYGSIFKGSLRHTQVAIKLLHAHSMQGPSEFQQEVDVLSKLRHSNLVTLIGACPESWTLIYEYLSNGSLEDRLSCKDNTPPLSWQTRIRIATELCSVLIFLHSSKPHGIVHGDLKPANILLDDNFVSKLSDFGISRLLSRGEGSSNNTTLYCRTDPKGTFAYIDPEFLSSGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDSGKLETLLDPLAGDWPFVQAEQLACLAMRCCEMSRKRRADLVSDVWRVLDPMRVSCGCSSSFRLGTEEHFQPPSYFICPIFQEVMQDPHVAADGFTYEAEALRGWLDSGHDTSPMTNLKLEHKNLVPNHALRSAIQEWLQQH
Length867
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy-0.517
Instability index51.73
Isoelectric point5.83
Molecular weight97544.04
Publications
PubMed=23525075

Function

Annotated function Functions as an E3 ubiquitin ligase. 
ECO:0000256	ARBA:ARBA00003861
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31133
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     186.96|      61|      69|     172|     240|       1
---------------------------------------------------------------------------
  172-  238 (91.20/77.08)	GHLIyTREGNSDGVDtdvPLLQPS...PNSDPEQSPHhfRSRSAVTLGQNNRAKLTNPAQDLYRRVR.SAN
  243-  307 (95.76/55.42)	GGSI.TEATSSDGTE...GLSTPSrfeAGGSPDDWDR..VSRRSVSGYSSCSSALGDLALVQYDRIEgSEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     130.11|      42|      70|     366|     411|       2
---------------------------------------------------------------------------
  366-  411 (57.50/49.18)	AEKD..AIDAIRR.AKASEL..LYNEElRQRKEI....EEALaREREELEkmKKQ
  434-  482 (51.84/30.46)	AESDqmAVNLEQKiISAVEL..LQNYK.KERDELhverDNAL.REAEELR..RKQ
  483-  505 (20.77/ 7.15)	GE............ASSSHLpqFFTE..FSFTEI....EEA..............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     138.90|      43|     277|     523|     565|       6
---------------------------------------------------------------------------
  523-  565 (72.46/49.25)	IFKGSLRHTQVAIKLL..HAHSMQGPSEFQQEVDVLS..KLRHSNLV
  805-  851 (66.44/44.50)	IFQEVMQDPHVAADGFtyEAEALRGWLDSGHDTSPMTnlKLEHKNLV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31133 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KYGGSITEATSSDGTEGLSTPSRFEAGGSPDDWDRVSRR
2) QYDRIEGSENGSTESHALSHFKELNHSSPPSVLDGNIDDS
3) VDTDVPLLQPSPNSDPEQSPHHFRSRSAVTLGQNNRAKLTNPAQDLYRRVRSAN
241
298
185
279
337
238










Molecular Recognition Features






MoRF SequenceStartStop




NANANA