<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31131

Description Uncharacterized protein
SequenceMEPVDWRTQFPADSRERVVNKIMNTLRKRFPSSDSEKCISEIKNIALKFEEKIYMVARNQKEYVMKIMSRLEAMVPSSSKSNPSYSGLNTSNPGGNQGQSIAVQSRDQSQAREQHSLPNVPNTIASGGFSSNLASARSTVSVPARVPLPNSATENSNSQKSVGNLSGQGAPINVSANNVRQEHGRQHSPHIGTQQNHEQLNHHLGIQVKQENITPSCIAQQKQLQQYQQQKLLKPAQKQTSQQSVMQTPAIRPSEAHVAPLSDLRQDQMSSFEQTTRSVIKNHPHTASRQIHQSQETPDIHQNVSSRPDNLAMQSPKQSHLMGNPGLQQQQTRLPGQPNNVQQWFQVQKMNLSSTHHEQLAERNNISVLQQSSQLLGIQCPSSGMRQSNFKMQEETQHTASALLPNQGQRSQPQSLERQLNSQSQPDKMRQLPNPTEQDQQQTYQTSGTVTSTSENRISFVDNWQEDTYRKVESLKSKFLTPLSDMLRKVTYTIQQFNSVSQQTERVSIERYKALKNRLTEIILHLNVPKSKITPSYKENLGSMERQILLILHTYGRAKPVPSLQHEQLPSDVHSMRQMVQLHSQTPQVHTHQDERKLPLQSVNLQCSATSNATNFVNSSRSPAEHPTLKHDMVHLRKNLTEQYSGQANSLTAVRQVASGSSKIPTGGSQKPKVQTLSQIPIHETQSNLNALDSSCSTLKDMHLKLPKEEPAVQTQNPKQELRRHMIMEQLVQQQKIVHQHHEPVKLQSGASFPHAVPKILGSSCQEISQYSSQIDKKNLLIPLTKARTTLYPANSPSIKISSLVPLAASSRTGDSEKPISDTSSLSNAGSTGDPQVNGAQSPSPFVISTPGMSASPLLEEYTNGIQCNTSTIISDELTVSEQPIQRLTKVVNLMSSKTISAAVLDIGSIMCTTDRILGPETDGRSIGSFGKDFVEMTNSHLLKRYLTWQDNTFPTRKLKRCRSTVPMHVVDSLPEFNDKEKFDLDSTAISYIRRPRIEVNQTLLEEITVINHQLIDTVLDISDEDTPPTVTSAPIKVGEGTIVRCSFIAVAISPSLKSEQLSIQPLRLLVPANYPLCSPIFLDKLRVDISNELEDLSAKVKSKLNISLRSLTEPLSLGEIARTWDVCARAAISEYAQQFGGGSFSSKCGMWEDCLSAA
Length1159
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.04
Grand average of hydropathy-0.631
Instability index59.48
Isoelectric point9.07
Molecular weight128915.82
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31131
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     866.73|     146|     146|     354|     499|       1
---------------------------------------------------------------------------
   49-  178 (140.84/54.32)	FEEKIYMV.ARN....................QKEYV...MKImsrleaMVPSSS..KSN......................P.SYSGL...............nT.SNPGG.N.Q.................G.QSIA.VQSRDQS................QAREQHS.L.....PNV...PNTIASG.GFSsnlASAR........STVSVPARVPLPNSATENS......NSQKS..V....GNL..SGQ..GAPIN..V.......SA..........NN
  181-  352 (157.66/61.63)	QEHGRQ...HSPHIGTQ..............QNHEQLnhhLGI......QVKQENITPSCIA.....QQKQ..lQ...Q...Y.QQQKL................LkPAQKQTS.QqsvmqtpairpseahvaP.LSDL.RQDQMSS................FEQTTRSvI.....KNH...PHTASRQ.IHQ...SQET.........PDIHQNVSSRPDNLAMQSP..KQSHLMGNPGLqqqqTRL..PGQ..PNNVQqwF.......QVQ...KM....NL
  354-  499 (238.69/96.83)	STHHEQLA.ERNNISVL..............QQSSQL...LGI......QCPSSGMRQSNFK.....MQEE...T...Q...H.TASAL................L.PNQGQRS.Q.................P.QSLE.RQLNSQS................QPDKMRQ.L.....PNP...TEQDQQQ.TYQ...TSGT........VTSTSENRISFVDNWQEDTY..RKVESLKSKFL....TPL..SDM..LRKVT..Y.......TIQ...QF....NS
  501-  650 (115.94/43.50)	SQQTERVSiERYKALKN..............RLTEII...LHL......NVPKSKITPS.YKenlgsMERQillI...L...H.TYG.........................RA.K.................PvPSLQhEQLPSDV................H..SMRQ.MvqlhsQTPqvhTHQDERKlPLQ...SVNL........QCSATSNATNFVN.............SSRSPAE....HPTlkHDMvhLRK.N..L.......TEQysgQA....NS
  653-  810 (106.28/39.30)	AVR..QVA.SGSS....................................KIPTGGSQKP..K.....VQTL...S...QipiHeTQSNLnaldsscstlkdmhlkL.PKEEPAV.Q.................T.QNPK.QELRRHM................IMEQLVQ.Q.....QKI...VHQHHEP.VKL...QSGAsfphavpkILGSSCQEISQYSSQID...........KKNLL....IPL..TKA...RTTL..YpanspsiKIS...SLvplaAS
  811-  974 (107.32/39.75)	SRTGDSEK.PISDTSSLsnagstgdpqvngaQSPSPF...V.I......STP..GMSASPL......LEEY...TngiQ...C.NTSTI................I.SDELTVSeQ.................PiQRLT.KVVNLMSsktisaavldigsimcTTDRI...L.....GPE...TDGRSIG.SF......GK......dfVEMTNSHLLKRYLTWQDNTFptRKLKRCRSTVP....MHV..VDS..L............................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.49|      18|      18|       7|      24|       2
---------------------------------------------------------------------------
    7-   24 (31.62/19.17)	RTQFPADSRERVVNKIMN
   27-   44 (31.87/19.39)	RKRFPSSDSEKCISEIKN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.54|      14|      18|    1085|    1098|       4
---------------------------------------------------------------------------
 1085- 1098 (22.14/12.69)	KLRVDISNELEDLS
 1104- 1117 (22.40/12.92)	KLNISLRSLTEPLS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31131 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EAMVPSSSKSNPSYSGLNTSNPGGNQGQSIAVQSRDQSQAREQHSLPNVPNTIASGGFSSNLASARSTVSVPARVPLPNSATENSNSQKSVGNLSGQGAPINVSANNVRQEHGRQHSPHIGTQQNHEQLNHHLGIQVKQENITPSCIAQQKQLQQYQQQKLLKPAQKQTSQQSVMQTPAIRPSEAHVAPLSDLRQDQMSSFEQTTRSVIKNHPHTASRQIHQSQETPDIHQNVSSRPDNLAMQSPKQSHLMGNPGLQQQQTRLPGQPNNVQQWFQVQKMNLSSTHHEQLAERNNISV
2) QQSSQLLGIQCPSSGMRQSNFKMQEETQHTASALLPNQGQRSQPQSLERQLNSQSQPDKMRQLPNPTEQDQQQTYQTSGTVTS
3) SNATNFVNSSRSPAEHPTLKHDMVHLRKNLTEQYSGQANSLTAVRQVASGSSKIPTGGSQKPKVQTLSQIPIHETQSNLNALDS
4) SSRTGDSEKPISDTSSLSNAGSTGDPQVNGAQSPSPF
5) TLKDMHLKLPKEEPAVQTQNPKQELRRHMIMEQLVQQQKIVHQHHEPVKLQSGASF
6) VPSLQHEQLPSDVHSMRQMVQLHSQTPQVHTHQDERKLPLQSVN
72
370
611
810
698
561
368
452
694
846
753
604










Molecular Recognition Features






MoRF SequenceStartStop




NANANA