<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31130

Description Uncharacterized protein
SequenceMDGSEIIEAHGSVALEAAPSPLSIVAIAINGNRKSKYIVRWALEKFVPEGNVFFKLIHVRPRITGVPTPMGNLIPLSQVREDVVAAYRKEIEWQASELLLPYKKMCAQKKVQVDVVVIESDDVANAIAEEIAKSAISNLVLGAPSRGMFKRKQKGLSSKISACSPRFCTIYAVSKGKLSSVRASDSESVASIRDDNSDTCSINSSSSYASGSQTGTDRGSVGSYSHFRSPSLPMQRFQALTTINQTLLSTKTNSNETIHSRCQSQDLEEGKDGMSSCPSNSDVVHTPSQPSSSGSFLTDNRSWTSDQASTSDVVTDYSSESQANINLELEKLRIELRHVKGMYAMAQSETIDASRKINNLNKRRSEEAIRLKEINSMEEKAKVFATQEKEKYEAAKIEAEYMRECVEREVSQRREAEMKAMHDAEEKEKLESVLVGPVQQYQKFMWDEIVTATSSFSEDLRIGMGAYGTVYKCSFHHTTAAVKVLHSKENRQTKQFQQELEILSKIRHPHLLLLLGACPEHSCLVYEYMENGSLEDRLLQKNSTPPIPWFERFRIAWEVASTLIFLHSSKPKPIIHRDLKPANILLDHNLVSKIGDVGLSTMLNLDPSVSSIYNDTGPVGTLSYIDPEYQRTGIISPQSDVYAFGMVILQLLTAKPARALTHLVETAISDRNLMDVLDPKAGVWPMEETRQLAELGLSCAELRRRDRPDLKEQVVPLLERLKMVADKARDSASTVQCRLPPNHFICPILKDVMQEPCVAADGYTYDRKSIETWIQENDKSPMTNLPLPNKNLIPNYTLLSAIMEWKSRGQ
Length810
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.06
Grand average of hydropathy-0.396
Instability index48.60
Isoelectric point6.46
Molecular weight90540.09
Publications
PubMed=23525075

Function

Annotated function Functions as an E3 ubiquitin ligase. 
ECO:0000256	ARBA:ARBA00003861
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31130
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     254.42|      64|      67|     145|     210|       1
---------------------------------------------------------------------------
  145-  208 (103.90/60.16)	SRGMFKRKQKGLSSKISACS.P..RFCTIYAVSKGKLSSVRASDSESVASIRDDNSDTCSINSSSSY
  212-  266 (67.96/38.26)	SQTGTDRGSVGSYSHFRSPSlPmqRFQALTTINQTLLST.KTNSNETIHS.RCQSQD..........
  268-  322 (82.56/48.33)	........EEG.KDGMSSCP.S..NSDVVHTPSQPSSSGSFLTDNRSWTSDQASTSDVVTDYSSESQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.09|      15|      37|     378|     393|       3
---------------------------------------------------------------------------
  378-  393 (21.46/20.59)	EEKAkVFATQEKEKYE
  417-  431 (26.63/19.76)	EMKA.MHDAEEKEKLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.67|      24|     709|      60|      94|       4
---------------------------------------------------------------------------
   60-   94 (38.89/44.71)	RPRITGVPTPMGNLIP....LSQVredvvaayrkeIEWQ
  779-  806 (40.79/24.65)	KSPMTNLPLPNKNLIPnytlLSAI...........MEWK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.59|      19|      38|     324|     342|       5
---------------------------------------------------------------------------
  324-  342 (30.54/22.13)	NINLELEKLRIELRHVKGM
  359-  377 (30.05/21.66)	NLNKRRSEEAIRLKEINSM
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31130 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) TNSNETIHSRCQSQDLEEGKDGMSSCPSNSDVVHTPSQPSSSGSFLTDNRSWTS
252
305










Molecular Recognition Features






MoRF SequenceStartStop




NANANA