<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31110

Description Uncharacterized protein
SequenceMATKTGSLNYWRNYFRTANSDIFDIIDHAIMVAASDCPKEFKLRRDRIAERLFSCRLTRCSGCDKMELAVPGGDGEDDDDDGGCKSGFDRDGGEVEAGASKESKVNSSRDDQGEMNMNQLSNYSYGLAEALTAEIEEESEIVGEVFRIKEIFNNCEEESDTVLFESLRKLQLMALNVETLKATEIGKAVNGLRKHGSKKIRHLARSLIDGWKDMVDEWVNATTALAGTEAMSDSVDPSFDDEEGLPSPPLDEGAFFATQTTSMELSQFFDGMDDFGNPRNNRDNGRKPSVEKQNIVKQKQQPSNEANVLPKENKNEQVKKQEVVKPNKLSNTDSGPGRPPKVNMEQKVNNETKIQQKTDKVAIQKRQLTGQQDKFKCSDEVAVQVKLEATKRKLQERYQQAENAKRQRTVQVMELQDLPKQGLARRNPHGKPGNHNRHWAHGRR
Length444
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.05
Grand average of hydropathy-0.952
Instability index43.36
Isoelectric point5.85
Molecular weight49971.20
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31110
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      86.41|      26|      27|     274|     300|       1
---------------------------------------------------------------------------
  262-  280 (24.89/11.47)	........SMELSQFFDGMDDFGNPRN
  281-  307 (38.82/27.12)	NRDNgRKPSVEKQNIVKQKQQPSNEAN
  310-  328 (22.70/10.13)	PKEN.KNEQVKKQEVVKPNK.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.77|      15|      18|     359|     376|       3
---------------------------------------------------------------------------
  359-  376 (21.44/18.38)	DKVAIQ......KRQLtgqQDKFK
  379-  399 (20.33/ 9.41)	DEVAVQvkleatKRKL...QERYQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31110 with Med26 domain of Kingdom Viridiplantae
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