<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31100

Description Uncharacterized protein
SequenceMGYNVGRNGGYDQTLKASSSLSQPPPSMLARWSNSNQQDLDVVCQRIVRTGGVHKGRWLLLMRTYRSTAPTASGIRGERIMHTVTPMGVSDPCTYVWLEDGSVPSRGEYRLQLAEKGAEEAARSRMAMLKDEEPAHFRTTFVTLKPPNSLDMLLTNLRASWIPGRQVGEREGWNRAWQAAGNAPHLTLDGFVFQIGLDWIVRVGNLSSPAGGAKGMILEAEYLPLVHMPPREDGDVTKLNDFLSSFLAGLFPASPGARRTVAAMEENLWVEASAEDIFENLYVVDEQKEQLEKPFVNGVSESQNAKVEMEVDKVLETPVDGEKGEEDNGDMAKTDEVDGDDIVLTEDDWVYGTDTVPPPDRRDWVGAEKDRRSAFSIMFVLRRENIL
Length387
PositionHead
OrganismDacryopinax primogenitus (strain DJM 731) (Brown rot fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Dacrymycetes> Dacrymycetales> Dacrymycetaceae> Dacryopinax.
Aromaticity0.07
Grand average of hydropathy-0.466
Instability index44.41
Isoelectric point4.83
Molecular weight43058.93
Publications
PubMed=22745431

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31100
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     171.63|      53|     156|       2|      65|       1
---------------------------------------------------------------------------
    2-   65 (80.41/74.90)	GYNVGRNGGYDQTLKASSSlsqPPPSMLARWSnsnqqdLDVVCQRIVRTG......GVHKGrwLLLMRTY
  164-  222 (91.22/56.03)	GRQVGEREGWNRAWQAAGN...APHLTLDGFV......FQIGLDWIVRVGnlsspaGGAKG..MILEAEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.28|      14|      27|     291|     304|       2
---------------------------------------------------------------------------
  291-  304 (24.04/13.95)	LEKPFVNGVSESQN
  315-  328 (24.24/14.13)	LETPVDGEKGEEDN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31100 with Med20 domain of Kingdom Fungi
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