<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31006

Description Uncharacterized protein
SequenceMWLPKTDATTKGTRSGSVAIAIDNDKTSQNALKWTMENLTSRGQTLALIHVVPKSQSSSDIEEGITHKQQIEKETKHLFVSFHCFCSRKEINCLDVVLEDVDKVKAIVEYVTVSAIENLVLGAPSRNSFMRRFKTDLPTSVSKAAPDFCNVYVIAKSKISSLRSSSRPAPYHPSVLSEFDNHETTENKHKTREATTPAYSRGRRSVDSDGPRSGFVKPPQGHMKLMGDFSDSESEYSFINASQQGSDISYISSGRPSVDRSSFTYDLPDSARTSRMSTSSEQSIGSNRLGIKFTDLGFLNNASTASEESGRTSCSYSSQSLGDVEAQMRRLRLELKQTMDMYSSACREALTARNEATELQRLRSEEERRMEELKMTEETAMSMVEKERAKARTATEAAEAAHRLAEAEAKRRLNAEMKVLKENDSFPRHSIVRYRKYSVQEIEEGTGNFAESRKVGEGGYGPVFRGHLDHTSVAVKVLRPDAAQGRSQFHKEVEVLSCIRHPNMVLLLGACPEYGILVYEYMAKGSLDDRLFRRGNTPAISWQLRFRIAAEIATGLLFLHQTKPEPIVHRDLKPGNVLLDHNYVSKISDVGLARLVPAVAENVTQCRATSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLLTAKQPMGLAYYVEQAVEEGKLKDMLDPAVPDWPLEEAMSLAKLSLQCAELRRKDRPDLGKEVMPVLNRLREMGEESLESVYYAGHGPMSHSSQVSYTSVRVCIDIESD
Length753
PositionTail
OrganismBrassica rapa subsp. pekinensis (Chinese cabbage) (Brassica pekinensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.482
Instability index54.83
Isoelectric point6.59
Molecular weight83975.03
Publications
PubMed=21873998

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31006
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.38|      40|      42|     339|     378|       1
---------------------------------------------------------------------------
  339-  378 (67.82/46.14)	MDMYSSACREALTARNEATELQRL.RSEEERRME.ELKMTEE
  381-  422 (53.56/34.86)	MSMVEKERAKARTATEAAEAAHRLaEAEAKRRLNaEMKVLKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.04|      16|      37|     269|     285|       2
---------------------------------------------------------------------------
  277-  301 (18.66/12.52)	STSSEQSIGsnrlgikftD.LGFLNN
  314-  330 (23.38/10.91)	CSYSSQSLG.........DvEAQMRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     146.76|      45|     488|     209|     259|       4
---------------------------------------------------------------------------
  163-  207 (79.89/51.97)	RSS.SRPAPYHPSVLSEFDNHETTEN.KHKTREATTPAY.SRGRRSVD
  212-  259 (66.87/51.15)	RSGfVKPPQGHMKLMGDFSDSESEYSfINASQQGSDISYiSSGRPSVD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31006 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) HPSVLSEFDNHETTENKHKTREATTPAYSRGRRSVDSDGPRSGFVKPPQGHMKLMGD
2) RNEATELQRLRSEEERRMEELKMTEETAMSMVEKERAKARTATEAAEAAHRLAEAE
172
353
228
408










Molecular Recognition Features






MoRF SequenceStartStop




1) EYSFI
235
239