<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30998

Description Uncharacterized protein
SequenceMVRSERRDERVVVAIDRGKGSQAALKWAVDNLVTSGESLTLVHVKLKQALVINANPNKSSNDVKELFLPFRCFCNRKDIRCEDAVLEDVDAAKGIIDYVKENAIDILVLGASKMTLLKRFKAADVTSMVMKGAANFCTVYAISGSKISSVRSATSSPPPLCAIRPQITARPSNNSMGQGETQDEIVIKYKSQRGFDQASVTDSDMSFVSSDRPSVDLMFPTSRLSIYSEFEDNRCSFATSSCSSEKQSVDLGSSYSAFSPGSQGSGRLSTWSLQDDVQAEMRRLKMELRYTMEMYSTACKEAITAKNMSKELHKWRVEKEHKLEEARQAKEAAMAMAENEKAKTRAAMEAIATANRIAEIEAQKRKQIETASLREAEDKNTSDRRYREYTIEEIEEATENFSINNKIGEGGYGPVYKGTLDYTKVAIKVLRPDARQGRSQFQQEVEVLTSIRHPNLVLLLGACTEYGCLVYEHLENGSVEDLLLKRGNNSPSLTWQLRFRIAAEIATSLNFLHQMKPEPVVHRDLKPANVLLDQHMVSKIADVGLARLVPPSVSDAVTQYRVTSAAGTLCYIDPEYQQTGMLGTKSDVYSFGITVLQLLTGKPPMSLTHQVQKAIEGGTFAEILDPDVHDWPLEEALVLAKIGLQCAELRRRDRPNLGKDVLPELKRLMDLAEESMSE
Length678
PositionTail
OrganismBrassica rapa subsp. pekinensis (Chinese cabbage) (Brassica pekinensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.379
Instability index45.29
Isoelectric point6.18
Molecular weight75439.09
Publications
PubMed=21873998

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30998
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.43|      25|      28|     293|     320|       1
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  293-  320 (34.84/33.64)	EMYSTAcKEAITAknMSK.ELHKWRVEKE
  324-  349 (36.59/22.38)	EEARQA.KEAAMA..MAEnEKAKTRAAME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      55.43|      13|     359|     271|     283|       2
---------------------------------------------------------------------------
  271-  283 (24.73/17.07)	WSLQDDVQ........AEMRR
  631-  651 (15.47/ 7.90)	WPLEEALVlakiglqcAELRR
  656-  667 (15.23/ 7.65)	.NLGKDVL........PELKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     173.69|      54|     392|     111|     166|       3
---------------------------------------------------------------------------
  111-  166 (88.32/64.80)	ASKMTLLKRFKAADVTSMVMKGAANFCTVYAIsgSKISSVRSATSSPP................PLCAIRPQ
  506-  575 (85.37/56.22)	ATSLNFLHQMKPEPVVHRDLKPANVLLDQHMV..SKIADVGLARLVPPsvsdavtqyrvtsaagTLCYIDPE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30998 with Med32 domain of Kingdom Viridiplantae
Unable to open file!