<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30994
Description |
Uncharacterized protein |
Sequence | MDQSQQRTVTAPSSSRSYQFHPARAKIIDLFNLYLGRGSRQKPDEPARDPPPNKSQKRVHAPSRDFPPGNEQFIVDFEQLHTQFNDPDQLRAITESVSVTMVLQCSNHAPRAEFLLFALRALFRIGFVNWDTFLPSLLSSVSAAESSLNQAASSSATSSQSLAPVGIGSPGNEQASLTPLAMRSSQRVRAAAVNSLRQISCKIILIGVEFNLKPVTHAEIFQHMMSWLVSWDMREMGTEKSLSEWLRSCLEVIWLLVDEGQSRIPFYELLRSGLQFIENIPDGDEALFTLVMEIHRRRDAMAMHMLMLDQHLHCPTFGTHRISSQTPVNVSAEAVAHLRYSPITYPSVLGEPLCGEDLAMSIPQGGLDWERAVRCIRHAIRTTPSPDWWKRVLVVSPGYRPSAQAGPIPGAVFTSDMIYANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGDDNHILRTNHVTWLLAQIIRVELVMTALNSDLKKVETTRKILSFHREDRTDPNNPQSVLLDFVSSCQNLRIWSLSATTRAYLNNDQLLKGKQIDEWWRSKGERMMDYMNLDDRSIGMFWVVSYTMAQPACETVINWLSSSGMAELPGLQPNERVMMMQEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQVVPSIAMVETYTRLLLISPHSMFRSHFTQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKAKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTETLNRITIMTLAITIKTRGIADADHLVYLQTMLEQILATSQHTWSEKTLRHFPSLLRDALSGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPSYVMTYLSHSFPQHRQYLCAGACMLMQGHPDNVNSANLARVLREVSPEEVTANIYTLVDVLLHKFHVDLQRGHNIKEILDKHDANLAFFFWTHEMLPLDIFILALIDRDDDPHALIIAKIILERPELMQRINMYCANRGPPEHWLFTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVVYRLIENNAMDTADKILTAYSHFLAYHPLRFTFVRDILAYFYGHLPGQLVVKILRVLGLSKIPFSESFPQYISNPSSPTCPPLDYFATLLLNLVNNVIPPLSSSSSNCSSRSGSMADMLNSSSARSLHGKTPGASQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCMNTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHTQLYMEASRVVRETWWLTDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLEGTHLIIKNLRPVTSVAMLRVVFRIMGPLLPRLANTHALFNKTLALLLSTMVDVFGKNSQTQVPVEASQIADLIDFLHHVVHYEGQGGAVQSSSKPRPDILALIGRAADSLRPDVQHLLSHLRTDPNTSIYAAAHQNTAKTNTS |
Length | 1534 |
Position | Tail |
Organism | Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica pekinensis) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.063 |
Instability index | 45.98 |
Isoelectric point | 7.06 |
Molecular weight | 171791.59 |
Publications | PubMed=21873998
|
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
transcription regulator complex GO:0005667 IBA:GO_Central
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GO - Biological Function | |
GO - Biological Process | positive regulation of gene expression GO:0010628 IBA:GO_Central
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP30994
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 159.01| 51| 546| 423| 489| 1
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423- 489 (76.46/76.80) WQEWLVFSDIfffliksgctdfvdFIDKLVLRlnGDDNHIL......................RTNHVTWLLAQIIRVELVMTALNSDL
954- 1026 (82.54/49.23) WTHEMLPLDI..............FILALIDR..DDDPHALiiakiilerpelmqrinmycanRGPPEHWLFTQVFKRNELQKALGNHL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.10| 11| 100| 61| 72| 3
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46- 56 (23.42/ 8.45) PARDPPPNKSQ
62- 72 (23.68/ 8.42) PSRDFPPGNEQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.80| 15| 547| 114| 139| 4
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119- 137 (23.51/32.92) LRALFRIgfvnWDTFLPSL
1409- 1423 (28.29/ 6.39) LRVVFRI....MGPLLPRL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 36.70| 9| 164| 387| 400| 7
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387- 400 (16.12/15.35) DWWKrvlvvSPGYR
552- 560 (20.58/ 8.61) EWWR.....SKGER
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.19| 10| 166| 266| 278| 8
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244- 253 (20.21/ 8.11) EWLRSCLEVI
268- 277 (17.98/ 6.58) ELLRSGLQFI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.81| 15| 509| 689| 706| 9
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692- 706 (24.76/17.25) TLLVLEILNYRLLPL
1209- 1223 (22.05/ 6.40) TQLVLETAVIEILSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.53| 17| 196| 1312| 1328| 11
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1312- 1328 (31.86/16.96) LLAQLPPDFHTQLYMEA
1508- 1524 (29.67/15.31) LLSHLRTDPNTSIYAAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 119.95| 37| 1015| 139| 176| 12
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139- 176 (58.21/49.36) SSVSAAESSLNQAA....SSSATSSQSLAPvGIGSPGNEQAS
1153- 1193 (61.74/47.17) SSSSNCSSRSGSMAdmlnSSSARSLHGKTP.GASQPGPANAS
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