<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30980

Description Uncharacterized protein
SequenceMWLPKANNGGKKETGKGSVAVAIDKDKGSQHALKWTIENLASRGQTISLIHVLSKSHSSSSSDIAEATPQQKKESEKLAQDLFVSFHCYCSRKEINCQDILLEDIDKVRAITEFVSSSAIENLVVGAASRNGFMRRFKTDLPTTLSKQAPDFCNVYVISKGKIASVRNASRPAPYKSSKQLSEFDNQHPTTPEKAPKHHDHSQSAGSTPSRPRRSVEYDSIRSPLVRRQGKQYGDLYDSDSDLSFISPSSHRDSHDISFISSGRPSVDRSSFTHDFPESGRSSRMSTSSEFKFSDPSFPNESSTFSEESGGTSSYSSQGVDDIEAEMKRLRLELKQTMDMYSTACKEALSARQQASALQKLRTEEERRLEEAKSSEEAAMSIVEKERAKAKAALEAAEAAKRLAEVEAKRRVTVEMTALKESDSFSHGFVRYRKYTVEEIEEATSNFDESKKVGEGGYGPVFRGYLDHTSVAVKVLRPDAAQGRSQFQKEVEVLSCIRHPNMVLLLGACPEFGILVYEYMAKGSLEDRLFMQGNTPPISWQLRFRIAAEIATGLLFLHQTKPEPIVHRDLKPANVLLDYNYVSKISDVGLARLVPAVAENVTQYRVTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQILTGKQPMGLTYYVEQAIEEGRLKDMLDPAVPDWPMEEAMSLAKLSLQCAELRRKDRPDLGKEILPELNRLRDIGEESLGNVINAGSHGNSANTSQVSISSSSDPFVTSSESLPEESQS
Length760
PositionTail
OrganismBrassica rapa subsp. pekinensis (Chinese cabbage) (Brassica pekinensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.534
Instability index55.80
Isoelectric point6.10
Molecular weight84220.62
Publications
PubMed=21873998

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30980
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.27|      17|      22|     377|     398|       3
---------------------------------------------------------------------------
  356-  372 (26.35/17.25)	SALQKLRTEEERRLEEA
  381-  397 (24.92/11.38)	SIVEKERAKAKAALEAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.14|      13|      22|     410|     424|       5
---------------------------------------------------------------------------
  410-  424 (16.34/16.17)	RRVTVEmtALKESDS
  433-  445 (21.80/13.20)	RKYTVE..EIEEATS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30980 with Med32 domain of Kingdom Viridiplantae
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