<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30978

Description Uncharacterized protein
SequenceMWMAKSNSVGIKEGGGSTGVVAVAIDKDKSSQHALKWAVDHLLQRGQSVILVHVKLRPSPLNNASSLHASSAKMSQDSSLVCRDPEGASKEIFLPFRCFCTRKDIQCKDVLLEEYDVAKALVEYANQAAVEVLVVGSSNKGGFLRFNKPADVPGTITKTAPDFCTVYVISKGKISTMRSASRSAPNIAPLRTPIQPPSLRPPQPVPSTATNMRADRRSFETQQRRSTEDRRSVEDQQRRSMEDLQRRSMEDQSDSFRSPFTRRGNGRSYGDLSVPESDISFVSSGRASIDRIFPNLYDNNDPNRTPPRLSNYSDMDYGPSLESSNYGRRSLDVSSPTDLSTGSFESERFSSASAMDDVESEMRRLKLELKQTMEMYSTACKEALTAKQKATELQRWKLEEERKLEEARLAEEAALAIAEKEKAKSKAAMEAAEAAQRIAELESKKRVNAEMKALKESDEKTKALNALANSDVRYRKYSIEEIEHATEFFAEKYKIGEGGYGPVYKCYLDHTPVAVKILRADAAQGMSQFQQEVEVLSCIRHPNMVLLLGACPEGGCLVYEFMANGSLEDRLFRLGNSPPISWQMRFRIAAEIGTGLLFLHQAKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQLITAKPPMGLTHYVERALEKGTLPDLLDPAVPDWPVEDTAEFAKLALQCAELRRKDRPDLAKVILPVLNRLRTLADESTESLLVINSPGPSPNSSQTSVKLEQMSGASISVPQ
Length797
PositionTail
OrganismBrassica rapa subsp. pekinensis (Chinese cabbage) (Brassica pekinensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.446
Instability index57.79
Isoelectric point7.13
Molecular weight88370.43
Publications
PubMed=21873998

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30978
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      81.13|      22|      23|     410|     431|       1
---------------------------------------------------------------------------
  422-  442 (25.62/16.14)	KAKSKAAMEA........aEAAQRIAELE
  444-  471 (23.04/13.77)	KKRVNAEMKAlkesdeKT.KALNALANSD
  472-  493 (32.47/22.41)	VRYRKYSIEE......IE.HATEFFAEKY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.44|      48|      54|     149|     202|       2
---------------------------------------------------------------------------
  149-  202 (77.61/60.62)	PadvPGTITKTAPD...FCTvyvISKGKISTMRSAS....RSAPNIAPLRTPIQPPSLRPP
  205-  259 (69.83/40.73)	V...PSTATNMRADrrsFET...QQRRSTEDRRSVEdqqrRSMEDLQRRSMEDQSDSFRSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.01|      27|      49|     544|     572|       3
---------------------------------------------------------------------------
  544-  572 (44.53/40.17)	MVLLLGACPEGgcLVYEFMANGS.LEDRLF
  596-  623 (45.48/32.02)	LLFLHQAKPEP..LVHRDLKPGNiLLDRNF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.78|      21|      22|     314|     335|       4
---------------------------------------------------------------------------
  314-  335 (33.74/25.91)	DMDYGpSLESSNYGRRSL..DVSS
  338-  360 (31.04/17.97)	DLSTG.SFESERFSSASAmdDVES
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30978 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) RIFPNLYDNNDPNRTPPRLSNYSDMDYGPSLESSNYGRRSLDVSSPTDLSTGSFESERFSSAS
2) RSASRSAPNIAPLRTPIQPPSLRPPQPVPSTATNMRADRRSFETQQRRSTEDRRSVEDQQRRSMEDLQRRSMEDQSDSFRSPFTRRGNGRSYGDLSVPESDISF
291
178
353
281










Molecular Recognition Features






MoRF SequenceStartStop




NANANA