<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30961
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MGDAPPLERTSIKASELVHRAVDKSYEDFRSLMFHLPTLREEERREPLLAHLQSARKRFAQLLAVLKWSVQSPLLHQCDSLLQHTSAYRNNVNETNDRLFFMHADLNRAKERRYDLSTAVDVLYGGSYLWLPTIIKNAMFPRELPEVEIEQAATKVTDLIRFRLIEAEIPDQVSNIKLEGGFVTCQAQGEFEIVLTLQGEENDAKWRVISVNTALTDPQAFGDHARAASTSALRIIRTNAPSAAHYNHLKNLVQRAMNKSEKPFVDAFVVMREFCSSLALQILALQGKLLMEGRWKNRIMITHHRDQNVLDICYWPKACTRKEAQTLTEQQRLIQQLSEPLATARKGFTLPYSESSLCVRLSFDPNKKKLLSVSLSPSLPPNLPGYAALLSALEVPSNMFSLSAENLLIAAMRAHVSAALFSIGRLLVVGSPEETASTQLVTGEKVAMVCSDTSLRIARSDIGGLRQFLEITFDIREGRFIVSSVAAAKHVTLYTSVKQLERILDTQCKIELGGNVVKSFPNDFALVSGDGKGNKSNEMIHASVRKVLCEIVADEIAQIGITFRGIEVLRNVNLNWERYLAFRQQQGGQTEDLTISDTALYFLLTSSKESTCYLVIEIDKYGEVDGVNGSVHEATEVEEYVRLPCFSLLQTSAGLPGQPSGVQFIQRFGAFKKEDLHPSVTRHNEIVVNCLCGSTRKRPYGLHGNNALADRSVRSTKKVLLESGQVQEKNGYWLDNAESHVVSRNVIPHIASVLLHAINMCSERIQLQHFVNFARRRKSRIRYSGEAGTLSGEGTGGQVVTLSFPEKVNTDPLTIVAIQGHLKHSGGFELCLQLASVPFKFILPKRPKEHLFSDRSHYVNARGQLIFKYPTTLVTSDVFSENPLEMFMVELICVVRPLCELAVKLEKMLTAVGRYTNDIKSDGHFYVESADPFAIVLACRAPNPRHCVAAGSSPDGMTTYRATVQFKQKMGFVVNYSHKAEHPLMHFIQSALNGHSDPAQFVEALERTCIPMGILASVVESQLLCAKYYRQDPVPDAKEDVANGGPKAFARGRMGGKGMKLGYKFKLPGEEKGYYAEKSYGGDDKSFVPAELVMIPRSQTQVRLSYGDRCAVDIYFLESSLGGVRVPSCSFEKGIVVDCHNFADKLRSTLSEMASA |
Length | 1156 |
Position | Tail |
Organism | Hyaloperonospora arabidopsidis (strain Emoy2) (Downy mildew agent) (Peronospora arabidopsidis) |
Kingdom | Oomycetes |
Lineage | Eukaryota> Sar> Stramenopiles> Oomycota> Peronosporales> Peronosporaceae>
Hyaloperonospora.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.177 |
Instability index | 39.27 |
Isoelectric point | 8.40 |
Molecular weight | 128763.23 |
Publications | PubMed=21148394
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP30961
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 383.29| 108| 117| 811| 927| 1
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811- 873 (78.74/50.40) ......................................................DPLTI..V.AIQG.HLKHSGGfELCLQLASVP.....FKFILPKRPKEHLFSDRSHYVNARGQLIFKYPTTL
877- 992 (145.12/109.89) DVFSENPLEMFMVELICVvrPLCELAVKLEKMLTAVGRYTNDIKSDGHfyvesaDPFAI..VlACRApNPRH......CVAAGSSPdgmttYRATVQFKQKMGFVVNYSH..KAEHPLMHFIQSAL
993- 1092 (159.43/101.50) NGHSDPAQFVEALERTCI..PMGILASVVESQLLCAKYYRQDPVPDAK...........edV.ANGG.PKAFARG.RMGGKGMKLG.....YKFKLPGEEKGY.YAEKS.YGGDDKSFV...PAEL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 316.66| 99| 595| 22| 126| 5
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22- 126 (159.13/96.86) VDKSYE.DFRSLMFHLPTLREEERREPLLAHLQSARKRFAQLLAVlkWSVQSPLLHQCDSLlqHTSAYRNN...VN....ETNDRLFFMHAdlNRAKERRYDLSTAVDVLYGG
618- 724 (157.53/82.25) IDKYGEvDGVNGSVHEATEVEEYVRLPCFSLLQTSAGLPGQPSGV..QFIQRFGAFKKEDL..HPSVTRHNeivVNclcgSTRKRPYGLHG..NNALADRSVRSTKKVLLESG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.65| 15| 18| 362| 378| 6
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364- 378 (26.00/21.60) DPN...KKKLLSVSLSPS
380- 397 (21.65/ 8.61) PPNlpgYAALLSALEVPS
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