<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30856

Description Uncharacterized protein
SequenceMSTKSRNRNSLLSSHNRSSYSNSTTKDEILSMKYSMEKPDLPIYPLSDQNQSHNQSSDSKTHTPQHHNHHHTQPSTQSKEAVYPDFIPWKDHTQLSPDQQEKERSRLNNVSFLNKGYFETPQVANEYYSARNLISATVFLSNENCNNVIKELSTYLTNAYKTRNEIINKIKHDSNHFKIPSRVTLTSNKRDVWLNELANPNVNMSKIGEKIPHGLRNKVLIEAICSRNVPMNRSIWLTKCVLYGELITLRRKHQNRLSITNSSMSEFRNVTSTSTSTTGMAGTVTEKFEIHWLQEWTQQVTDYILKFSKEMSLVGSIEKKEVYLKKFNFLLNYVKSLYIESLLDKPFFLSLILRFLKDGLPLQPKYLNDLFNATTDSNTTTTNIEKQDTMNNNDGDEEEDEGKVKSSSWLNEIDMNYGQRLTALTLIKIFWNDLIKADYLSKELTESLLLNYFFTDKLSASMKTGVSENLRQKILKLITETIKYLFEFNCNVFIIPTYWILIEDSLVKILLQDTHNVSEAEQKELVKQLELVKYRNESLIMNMKNEAKNDVKLEKSGSSSNLVSPSVTNDNVENDYVFINRNSDDILNIVEKLDNLKLNEEFSKLLKPNRTGNANWKLNLKVVLYWCVSPFRNYRSSTEDILLICNFLKNNISSNLTKADKTELDNEILEIIYHIAEGEFLKFNSLKLYVLINELYQLKLITIASYLRKLIASGIFFSQPGTHQDLENLSPIVRTHLKILENLPVLNNRQCDSILKKWTPSGFNFRGNFTHGQNILRELFIDKIRDNSFTEEPNLKCMTFMNSLNVGLQFLLINWLTTEIKSMVVSASKLIHFTPTVITNLYQFYNHAAGLTVFFKVVLQTILKNDGGMIIFYLDSLFLISKLVVRHFKLIKTISGSQESSCTAYDLFKLIIQVYKDLSNREYDHFRFDLIWSFMDSVTEKASDFKIDNHENETAKPYHSLTTKDNFDSPMHINTIDPSNNHQSQHQHHYETRSSTRYTSTDFRNDLAYLHSSPRRILSMEEIIEERGTLEVDINGLVAQLQFWFNNFQKLSEEQENSLVKIIRNSITSETSSIETVKEFITKSIGNLDNEASEVVRFLKKLVVFDILRIGELIKLLRPVCIEHDDESLIYEILIGQEDIEKQQFSCSQLVLLQINRYFYREKSSHPYMTLVFQGLLKRGSPYSNDFFVKYKYPVLQFLNQVMATNTKVIYRDLIVKLSSEDAIELLNLLLGFSEDKFIRTLHDFENFVKQANEFNLPICQILLSVISKTFNVGTSLDQFIGALLENVKFEFSSSNSFFGELFNYLSWENKLGILEILENKFLTETVVDTNGMEPFINNETLLPPFNDFFKKFTSSSSINIVQNDKSFFPKMCQFIDKLVVLSNLEEDINENVSIIISVFVKLLIIHQGSICELISNGTHDHSVISFVAKLIELLNSNYLNKYNDKLRILLYDLLLLMKITIAQEIHQVPESESTSPKQEVEPTSPQLDTSTTSPATDDQKDISKVEPTATTTTTGTTTTATTTNDKIINSTSSIQMLFDLPEPSKVNPFAAYLDKKLVDCSIMLDNDELNHSGDLYYFNNRDFYLKSTRNETAGLSSFGEDGNLKFRHSQIRDFKFKSFEILEDISHNSLNDGCINLQLFDAYTTRENPP
Length1651
PositionKinase
OrganismCandida maltosa (strain Xu316) (Yeast)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Debaryomycetaceae> Candida/Lodderomyces clade> Candida.
Aromaticity0.10
Grand average of hydropathy-0.347
Instability index40.41
Isoelectric point5.89
Molecular weight190588.40
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30856
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     865.83|     285|     355|     326|     680|       1
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  326-  608 (376.22/275.30)	...................................................................................KFNFLLNYV..KSLYIESLLDKPFFLSlilRFLKDGLPL.QPKYLNDLFNATTDSNTTTTNIEKQDTMNNNDGDEEEDegKVKSSSWLNEIDMNYGQR.LTALTLIKIFWNDLIKADYLsKELT..ESL..L............................................LNYFFTD..KLSASMKTGVSENLRQKILKLITETIKYLFEF.....NCNVFI.IPTYWI..LIED.SLVKILLQDTHNVSeaeqKELV....KQLELVKYR........NESLIMNMKNEAKNDVKLeksgsssnLVSPSVTNDNVEND.......YVFINrnsddilNIVEKLDNLKLNEEFSKLLKP
  609-  957 (405.41/323.74)	NRTGNANWKLNLKVVlywCVSPFRNY..........RSSTedillicnflknnissnltkadkteldneileiiyhiaegeflKFNSLKLYVliNELYQLKLITIASYLR...KLIASGIFFsQPGTHQDLENLSPIVRTHLKILENLPVLNNRQCDSILK..KWTPSGFNFRGNFTHGQNiLRELFIDKIRDNSFTEEPNL.KCMTfmNSLnvG............................................LQFLLIN..WLTTEIKSMVVSA..SKLIHFTPTVITNLYQFynhaaGLTVFFkVVLQTI..LKNDgGMIIFYLDSLFLIS....KLVV....RHFKLIKTI........SGS..QESSCTAYDLFKL........IIQVYKDLSNREYDhfrfdliWSFMD.......SVTEKASDFKIDNHENETAKP
  960- 1132 (84.19/42.08)	SLTTKDNFDSPMHIN...TIDPSNNHqsqhqhhyetRSST...............................................................................................................................................................................rytstdfrndlaylhssprrilsmeeiieergtlevdinglvaqLQFWFNNfqKLSEEQENSLVKIIRNSITSE.TSSIETVKEF.............ITKSIgnLDNEaSEVVRFLKKL..........VVfdilRIGELIKLLrpvciehdDESLIYE.........................................................................
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.53|      23|      30|    1576|    1605|       2
---------------------------------------------------------------------------
 1582- 1605 (37.26/33.74)	RDFYLKSTRN.ETAGLSSFgEDG..NL
 1613- 1638 (33.27/11.90)	RDFKFKSFEIlEDISHNSL.NDGciNL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     190.19|      43|     161|    1149|    1191|       3
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 1149- 1191 (75.70/51.06)	QLVLLQI..NRYFYRE.....KSSHPYMTLVFQGLLKRGSPYSNDFFVK.Y
 1261- 1303 (61.18/39.59)	QILLSVI..SKTFNVG.....TSLDQFIGALLEN.VKFEFSSSNSFFGElF
 1311- 1353 (53.31/33.38)	KLGILEIleNK.FLTEtvvdtNGMEPFIN..NETLL...PPF.NDFFKK.F
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.34|      21|      24|    1480|    1500|       4
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 1480- 1500 (38.43/23.30)	EVEPTSPQLDTSTTSPA..TDDQ
 1505- 1527 (31.92/18.15)	KVEPTATTTTTGTTTTAttTNDK
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.52|      41|      42|     112|     152|       5
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  112-  152 (68.31/43.84)	FLNKGYFETPQVANEYYSARN..LISATVFLSNENCNNVIKEL
  155-  197 (63.21/39.99)	YLTNAYKTRNEIINKIKHDSNhfKIPSRVTLTSNKRDVWLNEL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30856 with Med12 domain of Kingdom Fungi
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