<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30854

Description Uncharacterized protein
SequenceMSDSVRVFVKAISTIKALSSRSNYGSLPRPPAESRIKLYGLYKQATEGDVDGVMPRPVGFTPEDEGAKKKWDAWKREEGLGRTEAKKRYISYLIETMRVYASGTLEARELLNELEYLWEQIKDLPNNDDDDDNDFSHRIPLPSRSPTFSQTDRFSNRTPSLTGARTTTTSNLNKVYSHTRKNTTLSLNEYVQQQRLQQQQQHQQQQQQQQQQHQQQLHHHETASQPAFGGMANVTGGGAGSVYSLPGKVGSNNVIEDFKNWQGEVNMVINKLTREFVNSRREQAQRRDENDSENEDGLDDIQILKRRIVRILKVVGWNALKILKNFAVSLITMLFIVWCIKKNVVVERTLVKQPSARAGKQKKELIINMVLNTDENKWFIRLLSFINRFVGFV
Length393
PositionTail
OrganismCandida maltosa (strain Xu316) (Yeast)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Debaryomycetaceae> Candida/Lodderomyces clade> Candida.
Aromaticity0.08
Grand average of hydropathy-0.707
Instability index48.69
Isoelectric point9.52
Molecular weight45125.45
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
fatty-acyl-CoA binding	GO:0000062	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30854
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.89|      19|      19|     135|     153|       1
---------------------------------------------------------------------------
  134-  152 (35.58/21.12)	DFSHRIP..LPSRSPTFSQTD
  153-  173 (27.31/14.77)	RFSNRTPslTGARTTTTSNLN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.74|      13|      21|      81|      93|       2
---------------------------------------------------------------------------
   81-   93 (22.68/13.22)	GRTEAKK..RYISYL
  103-  117 (17.06/ 8.55)	GTLEAREllNELEYL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.88|      20|     217|      47|      80|       3
---------------------------------------------------------------------------
   25-   44 (37.23/24.74)	GSLPRP....PA.ESRIKLYGLYKQ
   52-   76 (30.65/31.92)	GVMPRPvgftPEdEGAKKKWDAWKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.03|      13|      19|     192|     204|       5
---------------------------------------------------------------------------
  192-  204 (23.27/13.48)	QQQRLQQQQQHQQ
  213-  225 (23.76/13.90)	HQQQLHHHETASQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30854 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IKDLPNNDDDDDNDFSHRIPLPSRSPTFSQTDRFSNRTPSLTGARTTTTSNLNKVYSHT
2) SLNEYVQQQRLQQQQQHQQQQQQQQQQHQQQLHHHETASQPAFGGMAN
121
186
179
233










Molecular Recognition Features






MoRF SequenceStartStop




1) RIKLYGLYK
35
43