<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30821
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MNDQLIPKVSLARLIRYTTRNCYKELQKLVENCLDEEGTVAKVLLYEFLLSERYRFTRLLVLLKWYCRYGGADEFCEEKIAESSSLLALYESSADGLWTVHNKLSDACLPLIPIQSATEILTTGGYSRLPSIVYRNFVSKEFLLSLDEGKTSPSVMQNNDWMGLVSRALLQSCLSKENDLRIFNWKDKQREQAVEVGNRRGGWSLVLMATRIGDHFSWKLLQVRVYIRGASLGGTTDRQSNQVSQSVLSKEQESYLRGICQHILEQNCGSEEESRLYISQAIAESGKFLEEKICVPLALDILRLQAFRLSKNPLFLFKIQKDIDAVLLRFWEDPLSSCTEIRISSLKEDDDMKDENISQQIVEYQNGCSIFVVRRWPFCIYMSLMDSKQRSDSSKDSLLRQVVMNKKSTKILSKTISEQILDISVQKISIESILFQLLAFKCQFLLERLKDDLTSRQGQELDAKQISLEYESVYLGDREEAVKVAYLIVEISKSLVIRIQMSLISGKLCCYTYEGYAWIKDKRRSTGYTEFSSMDYSGIVQFIIDHQKCIVRTSTYCQTKAVSLVIKEDYFTPRSLNEKLMNAVWDKYGLSCYADLDTCIALSPIGWFGTNESKRSLRSEGYEFYCDTLTPYNLFFVYQKDFHSSWLLTHSLNACLGARWLAIIETRKRQRELETVLEVAPLEWSFQQQLFDSNVKDNCHNGFSYPVEENSMRNIHVMRPLSIPAEKGVFYNSSSGIRRIWFDLAFSLLDEGYGLSWKRLLRRFSEVPWPENQGVRLWHFGGQNLKASLILTYAHGHVCLRRVTGDIFIAQQMSKLIRRISAYPSQFMDLVWKNWRELVVVSRPLCKNITLSSASTGLMKQIPSVYIRVDLRRQHTSRSMMIGTEQVKGEGRTIADFKANNKVNSTEAKLQRQRMLSQSIQHELPLPTIQIFPLTQFSKDACELLEEVLSWSPNHMDHYLDILLDHICFIVACLMLLGNRCFISWSSLFRFEISLPIIKEKERVMFCGFEVGCEESPKSILLKNLGHYMKSPNVGGPATTNKDKVEFFLTAGKKF |
Length | 1055 |
Position | Tail |
Organism | Galdieria sulphuraria (Red alga) |
Kingdom | Rhodophyta |
Lineage | Eukaryota> Rhodophyta> Bangiophyceae> Cyanidiales> Cyanidiaceae> Galdieria.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.202 |
Instability index | 52.12 |
Isoelectric point | 8.43 |
Molecular weight | 121630.93 |
Publications | PubMed=23471408
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP30821
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 343.31| 80| 93| 100| 183| 1
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100- 183 (127.14/104.59) VHNKLSDACLPLIpiqsATEILTTGGY..SRLPSIVYRNFVSKEF...LLSLDEGKTSP......SVM...QNNDWMGLVSRALLQSCLSKENDLRIF
196- 277 (120.65/88.58) VGNRRGGWSLVLM....ATRIGDHFSW..KLLQVRVYIRGASLGG...TTDRQSNQVSQ......SVLskeQESYLRGICQHILEQNCGSEEES.RLY
289- 371 (95.53/68.27) LEEKI...CVPL.....ALDILRLQAFrlSKNPLFLFK..IQKDIdavLLRFWEDPLSScteiriSSL...KEDDDMK..DENISQQIVEYQNGCSIF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.93| 21| 91| 510| 531| 2
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510- 531 (38.55/27.53) CYTYEGYAWI.....KDKRRSTGYtEF
599- 624 (35.38/20.31) CIALSPIGWFgtnesKRSLRSEGY.EF
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