<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30717

Description Uncharacterized protein
SequenceMPSTIQGDEGMNPIVVAIDKDKHSSSAVKWAVDHLVISNPALVLVHVRMKNSPNQVGGNGAGQSSNRGLSDQDSHKVFIPFRAYSARKGIAVKEVIIEDISVSKGLLDYINNYHITNVVVGASSRSAFSRKFWTHDVPTIVNKAAPDYCTVYVISKGKQQSVRPAAKPLASSSARLPSSQPWSAARLSNYSEPEDISRSAYKNSFGPDMMPKSGTSNASIDSLDFYSRDPKNSYTGRSSPSDDTALFAPLSRGSVDVTTQNLDFTQVSVNDNSSSSSMWESEMSRLKLELKQTMDMYNSACKDAVSANQTAKELHQWKVEEGSRFKQSRISEEAALAMAEMEKAKGRAAVEAAQKSQRLAEIEAKRRRYAELKARRETEEKNLAINDLSRNEICYRKYTIEEIEITTKSFSNSEKIGEGGYGPVYKGRLDHTPVAIKVLRSDAAQGMQQFKQEVQVLGLMRHPNMVLLLGACPEYGCLVYEFMNNGSLEDRLFRKGNTPPIPWEIRFKIAAEIATGLLFLHQAKPEPLVHRDLKPGNILLDSNYACKISDVGLARLVPPSVADCVTQYHMTSAAGTFCYIDPEYQQTGKLGTKSDIYSLGVMLLQIITARPPMGLTHHVERAIENGTFSDILDPTVPNWPLEEALNYAKLSLKCAELRKKDRPDLGSVILPELSRLKELGMSSLNTA
Length687
PositionTail
OrganismSolanum tuberosum (Potato)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum.
Aromaticity0.07
Grand average of hydropathy-0.409
Instability index46.39
Isoelectric point8.48
Molecular weight75925.38
Publications
PubMed=21743474

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30717
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     117.84|      28|      36|     214|     241|       1
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  172-  194 (32.39/16.40)	..SSARLPSSQPWSAARLSNY...SEPE
  214-  241 (49.18/28.48)	GTSNASIDSLDFYSRDPKNSYTGRSSPS
  253-  276 (36.27/19.19)	GSVDVTTQNLDF....TQVSVNDNSSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.39|      16|     388|     282|     300|       2
---------------------------------------------------------------------------
  282-  300 (21.00/20.17)	EMSRLKlELkqTMDMYNSA
  672-  687 (28.39/15.41)	ELSRLK.EL..GMSSLNTA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.35|      17|      40|      99|     115|       3
---------------------------------------------------------------------------
   99-  115 (30.89/21.48)	DIS..VSKGLLDYINNYHI
  136-  154 (27.47/18.32)	DVPtiVNKAAPDYCTVYVI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.95|      20|      28|     326|     351|       5
---------------------------------------------------------------------------
  319-  344 (22.70/11.68)	VEegsrfKQSRISE.EAA.LAMAEMeKA
  350-  374 (18.25/15.35)	VE..aaqKSQRLAEiEAKrRRYAEL.KA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30717 with Med32 domain of Kingdom Viridiplantae
Unable to open file!