<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30716

Description Uncharacterized protein
SequenceMPKSGTSNASIDSLDFYSRDPKNSYTGRSSPSDDTALFAPLSRGSVDVTTQNLDFTQVSVNDNSSSSSMWESEMSRLKLELKQTMDMYNSACKDAVSANQTAKELHQWKVEEGSRFKQSRISEEAALAMAEMEKAKGRAAVEAAQKSQRLAEIEAKRRRYAELKARRETEEKNLAINDLSRNEICYRKYTIEEIEITTKSFSNSEKIGEGGYGPVYKGRLDHTPVAIKVLRSDAAQGMQQFKQEVQVLGLMRHPNMVLLLGACPEYGCLVYEFMNNGSLEDRLFRKGNTPPIPWEIRFKIAAEIATGLLFLHQAKPEPLVHRDLKPGNILLDSNYACKISDVGLARLVPPSVADCVTQYHMTSAAGTFCYIDPEYQQTGKLGTKSDIYSLGVMLLQIITARPPMGLTHHVERAIENGTFSDILDPTVPNWPLEEALNYAKLSLKCAELRKKDRPDLGSVILPELSRLKELGMSSLNTA
Length478
PositionTail
OrganismSolanum tuberosum (Potato)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum.
Aromaticity0.07
Grand average of hydropathy-0.450
Instability index46.40
Isoelectric point6.50
Molecular weight53289.08
Publications
PubMed=21743474

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30716
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.09|      21|      28|     117|     142|       2
---------------------------------------------------------------------------
  110-  136 (24.77/23.80)	VEegsrfKQSRISE.EAA.LAMAEMeKAK
  141-  166 (21.32/ 6.01)	VE..aaqKSQRLAEiEAKrRRYAEL.KAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.08|      25|      88|     307|     332|       4
---------------------------------------------------------------------------
  307-  332 (41.53/30.11)	GLLFLH..QAKPePL.....VHRDLKPGNI..LLD
  391-  424 (29.54/16.27)	GVMLLQiiTARP.PMglthhVERAIENGTFsdILD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.77|      15|      36|       2|      16|       6
---------------------------------------------------------------------------
    2-   16 (26.51/14.10)	PKS.GTSNASIDSLDF
   40-   55 (22.26/10.99)	PLSrGSVDVTTQNLDF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30716 with Med32 domain of Kingdom Viridiplantae
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