<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30714

Description Uncharacterized protein
SequenceMGSQNPGEDSIVVAVDKDKSSSSAVKWAIDNLLGNNQSLVLVHVRVKNSPKPTLDSNGGLSDEGTQNVFIPFKAYSARKRIVVKEIVIENTEASKGLLEYINSHSVSNIVLGASSRSTLGRKYWTHDVPTLVNKAAPEFCSVYVVSKGKQQSVRPAAKSLPSSVPARQPSSSAWSAPRSSNSGSEDSTRFSYMRSEQKIVESEKTRGEKGPSIVPIDNLHSPEMTNPYKHASQPDGNMRYARISPRSVDMTSENLDFTQVAIRETPMNGSSSYSVDAEMKRLKLELRQTMDMYNAACKEAVMANQAADELNKWKIEEARKFEQARFAEEAALAIAETEKAKCRAAIEAAKKAQKMAEIEAQRRKYAELKAKRETEKKKQAMNVRSQNDIRYRKYTIEEIEAATKKFSNAQKIGEGGYGPVFKGKLDHTPVAIKVLSPDAAQGKKQFQQEVEVLSLIRHPNLVLLLGACPEYGCLVYELMNNGSLEDRLFRKGNTPSIPWEIRFKIAAEIATGLLFLHQSKPEPLVHRDLKPGNILLDKNYVCKISDVGLARLVPSSVADCVTQYHMTSAAGTFCYIDPEYQQTGRLETKSDIYSLGVMLLQIITARPPMGLTHHVERAIEKGKFADFLDPTVPNWPVEEALKFAKLSLKCAELRKKDRPDLGSVVVPELTRLSEFGMSSMPGIG
Length684
PositionTail
OrganismSolanum tuberosum (Potato)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum.
Aromaticity0.06
Grand average of hydropathy-0.459
Instability index44.36
Isoelectric point9.07
Molecular weight75829.80
Publications
PubMed=21743474

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30714
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     148.61|      45|     169|     255|     299|       1
---------------------------------------------------------------------------
  255-  299 (76.94/49.52)	LDFTQVAIRE.TPMNGSSSYSVDAEMKRLKLELRQTMDMYNAACKE
  425-  470 (71.68/45.68)	LDHTPVAIKVlSPDAAQGKKQFQQEVEVLSLIRHPNLVLLLGACPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.62|      16|      18|     147|     162|       2
---------------------------------------------------------------------------
  147-  162 (26.32/15.22)	KGKQQSVRPAAKSLPS
  167-  182 (28.30/16.91)	RQPSSSAWSAPRSSNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.63|      18|      96|     381|     421|       3
---------------------------------------------------------------------------
  346-  368 (25.13/30.64)	IEAAKK....AQKMAEieaqrRKYAEL
  399-  420 (27.50/17.02)	IEAATKkfsnAQKIGE.....GGYGPV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30714 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) RPAAKSLPSSVPARQPSSSAWSAPRSSNSGSEDSTRFSYMRSEQKIVESEKTRGEKGPSIVPIDNLHSPEMTNPYKHASQPDGNMRYARISPRSV
154
248










Molecular Recognition Features






MoRF SequenceStartStop




1) NMRYARISPR
237
246