Description | Uncharacterized protein |
Sequence | MECVVQGIIETQHVEALEILLQGLCGVHKQSLRIHELCLKSVPNLGLVASDIRLLCDLEQPEPAWTVRHVGGPMRGAGAEQISVLVRPMQESKISKNALRLFYSLGYKLDHEQLRVGFAFHFQRGAQITVTVSSINKMLKPHAIDDAVPVTPGIQLVEVTAPASSENYNEVVASVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGTK |
Length | 216 |
Position | Head |
Organism | Solanum tuberosum (Potato) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum. |
Aromaticity | 0.05 |
Grand average of hydropathy | 0.174 |
Instability index | 42.53 |
Isoelectric point | 6.23 |
Molecular weight | 23130.51 |
Publications | PubMed=21743474 |
Annotated function |
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central |
GO - Biological Process | carpel development GO:0048440 IEA:EnsemblPlants negative regulation of transcription, DNA-templated GO:0045892 IEA:EnsemblPlants petal development GO:0048441 IEA:EnsemblPlants production of miRNAs involved in gene silencing by miRNA GO:0035196 IEA:EnsemblPlants regulation of defense response to fungus GO:1900150 IEA:EnsemblPlants regulation of DNA-templated transcription, elongation GO:0032784 IEA:EnsemblPlants regulation of DNA-templated transcription, initiation GO:2000142 IEA:EnsemblPlants regulation of DNA-templated transcription, termination GO:0031554 IEA:EnsemblPlants regulation of histone H3-K36 trimethylation GO:2001253 IEA:EnsemblPlants regulation of photoperiodism, flowering GO:2000028 IEA:EnsemblPlants regulation of salicylic acid mediated signaling pathway GO:2000031 IEA:EnsemblPlants regulation of timing of transition from vegetative to reproductive phase GO:0048510 IEA:EnsemblPlants regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central regulation of vernalization response GO:0010219 IEA:EnsemblPlants response to abscisic acid GO:0009737 IEA:EnsemblPlants response to ethylene GO:0009723 IEA:EnsemblPlants sepal development GO:0048442 IEA:EnsemblPlants specification of floral organ number GO:0048833 IEA:EnsemblPlants stamen development GO:0048443 IEA:EnsemblPlants termination of RNA polymerase II transcription GO:0006369 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP30672 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 99.51| 32| 40| 132| 164| 1 --------------------------------------------------------------------------- 132- 164 (49.70/35.15) VSSINKMLKPhAIDDAVP.VTPGIQLVEVTAPAS 175- 207 (49.82/30.23) VSSFCEYLAP.LLHLSKPgVSTGVVPTAAAAAAS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 50.15| 17| 17| 18| 34| 3 --------------------------------------------------------------------------- 18- 34 (28.50/18.52) EILLQGL..CGVHKQSLRI 36- 54 (21.65/12.55) ELCLKSVpnLGLVASDIRL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
NA | NA | NA |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab