<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30668

Description Uncharacterized protein
SequenceMSQRSFTGDQNKATVVAIDKDKGSQYALKWAVDTLIGKGKNVTLLHVKVRPSVSLPNADVSDGTPRVYRSDPDSQAKELFLPFRCFCNRKNIQVNEVVIEGIDIATSISDYVTANVIEILVVGAASRNGFVSRFKTMDVPTAVSKVIPGFCTVYVIAKGKVQSTKNASSPVPSSPTPVQQNHSTSSLGAKLGFADTRYAQISSDTKGSVTDIRSPYASRSSADDLDSIKSPFNRGKGINRSYGDLSVAESDLSFVSSGRPSSTFPISMDSSHDLGLPPRLSNSSDTDVKYSAPRLSNSSETESRLSFGSSFSATRLSEANGFSSNSFDSGNGSWSSPSNMEDIEAEMRRLKQELKQTMDMYSSACKEALSAKHKAMELHRWKVEEEQKLEEARLAEEAALAVAEKEKAKCRAALEAAEEAQRIAEREAQRRISAERKALKESEEKKKVLDALAQSDCRYRKYTIEEIETATDNFAATRKIGEGGYGPVYKCYLDHTQVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDRLFRRGSTQVLPWQLRFRIAAEVGTSLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSIADSVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSFGIMLLQIITARPPMGLTHHVERSIEKGTFADMLDPAVPDWPMEEALTFAKLALKCAELRRKDRPDLGTVILPELNRLRVLAEEAMQPMHFGSSPRSPTSESRSTSQVISGSDSNKSRSSNPFSSSTKSSGE
Length794
PositionTail
OrganismSolanum tuberosum (Potato)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum.
Aromaticity0.07
Grand average of hydropathy-0.433
Instability index51.03
Isoelectric point8.09
Molecular weight87322.57
Publications
PubMed=21743474

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process
pollen tube growth	GO:0009860	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30668
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     155.63|      46|      53|     249|     300|       1
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  249-  295 (78.09/55.27)	ESDLSFVSS...GRPSSTFPISmDSSHDLGLPPRLSNSSDTDVKYSAPRL
  302-  350 (77.54/40.64)	ESRLSFGSSfsaTRLSEANGFS.SNSFDSGNGSWSSPSNMEDIEAEMRRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.91|      42|      49|     385|     432|       2
---------------------------------------------------------------------------
  385-  432 (54.71/42.87)	EEQKLEEarlAEEAAL...AVAEKEkakCRAALEAAEEAQRIAER.EAQRRI
  435-  480 (55.20/30.11)	ERKALKE...SEEKKKvldALAQSD...CRYRKYTIEEIETATDNfAATRKI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.53|      25|      49|     529|     555|       3
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  529-  555 (41.64/36.29)	MVLLLGACPEfgCLVYEYMANGS.LDDR
  581-  606 (40.89/27.59)	LLFLHQTKPE..PLVHRDLKPGNiLLDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.11|      13|      17|     212|     225|       4
---------------------------------------------------------------------------
  212-  225 (19.46/15.93)	IRSPYA.....SRSSAdDL
  228-  245 (19.64/10.21)	IKSPFNrgkgiNRSYG.DL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.42|      10|      17|     121|     130|       5
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  121-  130 (18.09/10.53)	VVGAASR..NGF
  139-  150 (14.33/ 6.82)	VPTAVSKviPGF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30668 with Med32 domain of Kingdom Viridiplantae
Unable to open file!