<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30667

Description Uncharacterized protein
SequenceMWLPNSKGSPGSKKGNGNGTGVVALAIDKDKGSQYAIKWATDNLVKRGQTLVLIHVVTKPIASQYGNCGGVHVVDGNLSPHGQNLEKQTKELFLTFHCFCTRKDIRCLDVILEDADVPKALTEYLSSAAIQNLVLGASRHGFIRRLKVTDIPSSVSKGAPDFCTVYVISKSKISSVKNASRPAPMASPLYKKIQQLEEHVHSGGFTPTATNRAIHIGSVGDRSQRRSFVTDDSRKIGSPFDRRRVIPSRIFSDLSEADTDLSFVSSGRPSTDRTSSLMYDGMDSGRISQISTSSDSSFGSERLGARGSELSSFNDFSLSSFETDDGEAEMRRLKMELQRTMDLYSTACKEALTAKQKSVELNLWRVEEEKRLEEARLAEEAAKVTAEKERDKYRVAMETAEAAQRLAELESKRRVDAEMQAHKEAEEREKAMMNLGQVDFRYRRYNIEEIEEATQFFSDSLKVGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQQEVEVLSRMRHPNMVLLLGACPEYGCLIYEYMANGSLEERLMRRGDKKSTLSWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNFVTKISDVGLSRLIPPSTTEEVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGILLLQLITAKQAMGITHYVSRCIEKGEELIEILDPSISDWPIEETLNFAKLALQCAELRRKDRPDLGKIVLPELSRLRALGEENMGPLVIGGSACPSPSHSQAYTSQEMSSEPRANSGLSIKSVSTPSYSQEKQSGSGDE
Length788
PositionTail
OrganismSolanum tuberosum (Potato)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum.
Aromaticity0.06
Grand average of hydropathy-0.445
Instability index50.97
Isoelectric point6.64
Molecular weight87490.20
Publications
PubMed=21743474

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30667
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.96|      27|      27|     376|     402|       1
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  376-  402 (42.08/34.31)	RLAEEAAKVTAEKERDKYRVAMETAEA
  405-  431 (42.88/35.13)	RLAELESKRRVDAEMQAHKEAEEREKA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.67|      28|     223|     487|     520|       2
---------------------------------------------------------------------------
  487-  520 (46.23/41.76)	RPDaaQGRSQFQQevevLSRMR...HPNM.VLLLG..ACP
  711-  744 (39.43/22.36)	RPD..LGKIVLPE....LSRLRalgEENMgPLVIGgsACP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.68|      25|      32|      20|      51|       4
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   27-   51 (44.12/43.46)	IDKDKGSQY....AIKWATDNLVKRGQTL
   57-   85 (39.56/22.29)	VTKPIASQYgncgGVHVVDGNLSPHGQNL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.02|      19|      22|     201|     222|       5
---------------------------------------------------------------------------
  201-  222 (29.49/27.14)	HSGGFtptATNRAIHIGSVGDR
  224-  242 (34.53/21.93)	QRRSF...VTDDSRKIGSPFDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.10|      16|      22|     286|     305|       6
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  286-  301 (27.72/24.38)	RISQISTSSD...SSFGSE
  306-  324 (23.38/ 8.56)	RGSELSSFNDfslSSFETD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.37|      21|      22|     145|     166|       7
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  145-  166 (30.49/25.99)	RLKVTDIpSSVSKGAPDFCTVY
  170-  190 (34.88/23.96)	KSKISSV.KNASRPAPMASPLY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30667 with Med32 domain of Kingdom Viridiplantae
Unable to open file!