<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30644

Description Uncharacterized protein
SequenceMAEMQQFFLPYRGICARKGIQAQEVILQDTDVAQALTEYISQKFITTIVFGASTRNALTRAFKIQDVPSSLSRSVPEFCSIYAISRGKVLKLKSASQPATPSSKASSSQTGFSHNSPISRGHIPQGSWGSIGTFEPIDAGSRSISSDSSSASDRHPASQGTSPNYSSASERTPKAWSDSQHSSRNPSPDRSVSTIGEVFNKIQLTRQPGCKNLTPIPSWGNSGDFGEWAPPTELVGSSENSSQAFMNSNMDTTKILHDRHLGSLLPPSQHKVNNLNLRMRPKENSFYSTSGSSNLSSSSSYRFSDMSFEHSDSSHNVSDASRCSISSQNADELEEEMKRLKFELKQSLDLHNGICRRQAREIDRSTTKETCNLEEAKEAPEASHAMLEKEKQKCKAALEVAQMAQHMAELESKKRKGVEKKFRHEAEEKKKAQDAFAGSENCYRRYSTDEIEAATNHFSNSQKIGEGGYGPVYQGYLDHTSVAIKVLRSDITQGQIQFQKEIEVLSRLRHPNVVLLLGTCPEYGCLVYECMENGSLEDRLFCKDKSSPIPWPARFRIAAEIAAALHFFHRTKPEPIVHRDLKPANILLDANYKSKISDVGLARLVPASVSGRFTQCLMTSAAGTFCYIDPEYQQTGMLNTKSDIYSLGIMLLQIITARPPMGLTHHVERSIEKGKFDDILDPSVSDWPLEEALSFAKLSLKCCELRRKDRPDLGSVILPELKRLKNIALDYRPGGLLTLRPSSSQESLAVSEEVRNSISDSQSDKAA
Length767
PositionTail
OrganismSolanum tuberosum (Potato)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum.
Aromaticity0.07
Grand average of hydropathy-0.554
Instability index52.21
Isoelectric point8.04
Molecular weight84956.59
Publications
PubMed=21743474

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30644
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.55|      24|      24|     162|     185|       1
---------------------------------------------------------------------------
  123-  148 (21.76/ 6.61)	IPQ..GSWGSIGTfePiDAGSRSISSDS.
  162-  185 (45.52/20.81)	SPN..YSSASERT..P.KAWSDSQHSSRN
  187-  212 (28.27/10.50)	SPDrsVSTIGEVF..N.KIQLTRQPGCKN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     264.10|      76|     449|     257|     332|       2
---------------------------------------------------------------------------
  238-  317 (125.26/67.34)	SENSSQAFMNSNMDTtkilHDR.HLGSLLPPSQHKVNNLNLRMRPKENSFYSTSGSSNLSSSSSYRFSD.MSFEHSDS..SHNV
  318-  386 (100.80/52.86)	SDASRCSISSQNADEleeeMKR..LKFELKQSL.DLHNGICRRQAREIDRSTTKETCNLEEAK..........EAPEA..SHAM
  709-  750 (38.03/15.71)	....................DRpDLGSVILPELKRLKNIAL......................DYRPGGlLTLRPSSSqeSLAV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.14|      21|      32|      68|      88|       3
---------------------------------------------------------------------------
   68-   88 (39.41/28.30)	PSS.LSRSVPEFCSIYAISRGK
  101-  122 (35.73/24.80)	PSSkASSSQTGFSHNSPISRGH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      29.00|       9|      16|     405|     414|       5
---------------------------------------------------------------------------
  405-  414 (12.61/10.95)	QHMAElESKK
  423-  431 (16.40/ 8.95)	RHEAE.EKKK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30644 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AGSRSISSDSSSASDRHPASQGTSPNYSSASERTPKAWSDSQHSSRNPSPDRSVSTIGEVFNK
2) GNSGDFGEWAPPTELVGSSENSSQAFMNSNMDTT
3) ILHDRHLGSLLPPSQHKVNNLNLRMRPKENSFYSTSG
4) KSASQPATPSSKASSSQTGFSHNSPISRGHIPQGS
5) YRFSDMSFEHSDSSHNVSDASRCSISSQNA
139
220
255
93
301
201
253
291
127
330










Molecular Recognition Features






MoRF SequenceStartStop




1) DYRPGGLLTL
730
739