<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30633

Description Uncharacterized protein
SequenceMAVVTGQQSSLWDGVIELTKLAQLKGTDPLMWAMQLSSTLNSAGHSMPSTDVASLLVSHICWGNNDPIAWKFLEKALALRIVPPMFVLALLSNRVIPTRRGYPVAYRLYMELLKIYAFSLPSLINGPNYQKIMEAINDTLHLSQIFGLQGSESGLIVVGFVFTIVWELLDASLDDEGLLELTAEKKSRWNITSQDMGLNNHDGFAGGRTEKQELLSKSNTVMAIEIIGELFRDKVTSAILYLVRTNMPTLWESFTQNLRLLVSNSSALRNSKNISPEALVQLTSDDHVVLSRKCKTSSHKRFHAVMASGSLGSSADQCHGASPAVLWLPIDLFLEDIMDGSQVAVTSAAETLTGLVKALQAVNSSPWKDTFLGLWIAALRLVNRERDSSEGPVPRLDTCLCVLLSITPLAIVNLLEEEEMNCSSTNQRKESSRKRHQDLVFSLQQLGDFEGLLTPPLPAAPLANLAAAKAMMFLSGISVGSGYFEGMSLNDIPVNCVGNLRHLIVEACIARNILDTSAYLWPGYVKGRCNQVPRSVSSQMPGWSSLMKGSPLTPQMVSSLVTTPASSLAEIEKIYEIAVNGSDDDKVSAAAILCGASFARGWNIQEHTVLFITRLLSPPVPANYSGTESHLIGYARFLNVLLIGVSSIDCVQIFSLHGLVPQLAGALMPICEAFGSCAPNVKWIVMSEEISSHAIFSNAFTLLLKLWRFDQPPLEHRMDAVPVGAHLTPEYLLLVRNSQLTSSDDLQKDQSKIKRLTRLSSPLSGEPIFLDSFPKLTLWYRQHQACIASPLSGLVPGTPVHQIVEALLNFMFRKINRTGQSLTPVISGSSSSSGPGNEDVSLHLKLPAWDILEAVPFVLDAALTGCAHGRLSPRELATGLKDLADFLPASLATIVSYFSAEVTRGIWMLASMNGTDWPSPAANLAAVEQQIKKILAATGVNVPSLTVGKHSSKLK
Length955
PositionTail
OrganismSolanum tuberosum (Potato)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Solanoideae> Solaneae> Solanum.
Aromaticity0.07
Grand average of hydropathy0.138
Instability index46.46
Isoelectric point6.26
Molecular weight103868.76
Publications
PubMed=21743474

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30633
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     254.13|      85|     410|     271|     375|       2
---------------------------------------------------------------------------
  271-  375 (124.23/104.85)	SKNISPEALV.....QLTSDDHvvlsRKCKTSSHKRfhavmasGS....LGSSADQChGASPAVLWLPID...LFLEDIMDGSQVAVTSAAET.LTGLVKALQavnsspwkDTF..LGLW
  581-  639 (55.03/21.77)	...........................................GSdddkVSAAAILC.GASFARGWNIQEhtvLFITRLLSPPVPANYSGTEShLIGYARFLN.................
  724-  779 (74.87/38.45)	GAHLTPEYLLlvrnsQLTSSDD....LQKDQSKIKR.......................................LTRLSSP............LSGEPIFL.........DSFpkLTLW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.58|      18|     240|     541|     560|       3
---------------------------------------------------------------------------
  541-  560 (26.50/27.59)	PgWSSLMKGSPLtPQMVSSL
  790-  807 (33.08/21.91)	P.LSGLVPGTPV.HQIVEAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     114.40|      25|      35|      48|      81|       4
---------------------------------------------------------------------------
   50-   74 (46.81/39.70)	TDVASLLVSHICWGNND.......PIAWK.FLE
   85-  111 (30.66/10.71)	MFVLALLSNRVIPTRRG......yPVAYRlYME
  823-  853 (36.93/15.96)	TPVISGSSSSSGPGNEDvslhlklP.AWD.ILE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30633 with Med33 domain of Kingdom Viridiplantae
Unable to open file!