<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30610

Description Uncharacterized protein
SequenceMVRLVQWHLTEELLVPSVLIEWSCHQLQERDSVEALELLLPIVLGLVETITLSQTYVRMFVEILVKRLSDASAVDNPKRSSISSVIAELLRYMVLAVPDTFVSLDCFPLPSFVAPDVYGRGALLKITGGGEMSSSKRRDVYRYLSCGYAVCSIQRRASDLATLASPNVHARGAAKVVQALDRALVTGNLTMAYSSLFNDLSDALMEERWIKEVSPCLQSSLMWIGTVELSLICSIFFLCEWATCDYRDCRTSPSQNVKLTGRRDLSQIHLAVSILKNKMTEMNKLSRSKSSSRIAVNNIGKGSSLNDASVAATKVGDSSGLRSNGKNEEEKKEKKDIFESPGPLHDIIVCWLDQHEVSSAAGFKRVDVLIIELIRSGVFYPQAYVRQLIISGVTDKNGTLLDMERKRRHHRILKQLPGSSLFDILEEDIVAEQQQLHEVLSTYSSERRLVLSELSSGQSFDASNRGGYTSSSYPRIPSGGTNHGGVPEQVEDVKVLVSSLLCFIYPHSAESEQNETKINFQGSSTSTLTQVDTGEAKIGCEDCMRINGQKLDERASPFQAFPLIQSDEEDVWWVRKGTELQESFKAEPALKSIKQTSRGRAKVVRKTQNLAQLTTAKIEGSQGEASTSHLCESKLSCPHHKPSTDGDNAKDADHTRMTNLAEVGKSLKKLRLLERRSISVWLLKSVRQLVEGNETTACKASNSISSFSSQPEDKTASKWRLGDEELMSILYILDTCCDLASATRFLVWLLAKIRGGQVGRSVAHMKNRDNHVCQVGEAFVFSSLLRYENILLATDLLPEVLNASTNRNFVLATARHPAPAAFPYTRYFLRKYRDVASVVRWEKNFRTTCDQRLLADLDNGRSIDGDFVSSSGVLGGEEIDDQVRQKLNGRGSRIIPNMKEIVQRQAEEIQRNLKEKKIPAAPKSPSFEKEDSYQIAHDTVLGLVECIRQNGGASPDGDPSAVASAVSAIVVNAGHVIAKHLDFAGGNYHGVASIGNSLSFVRHTLHIHISSLCLLKEALGDRFSRVFEVALAVEASSAVTAALAPPKVQRNQFQPSSETHDAYGNHTNEPLSTSGKGFVGRAAKLAAAISALVVGAVVHGAVSLERMIAVLKVKDGLEVQQVLRGLRPSTNGASRSSVTFKMDNSIEVLVHWFRILLGNCRTIYDGLIADILGESYVLALSRLQQKLPLSVVFPPAYSIFAMVRWRQYILSREDMQVYQSIANAINDITRHQPFRDICFRNTHQLYDLLAADVGDSEFAAMLETHCSDKNVKQLFVPLRGRLFLNSLVDCKTPAAIQVDGSEPGEAKENELKLLSERLVQSLDTLQPAKFHWQWVELRLLLDEQALAEKLDKAEKSKIPMPILMTLADGLRKLSPNSESFTLSESEKGFTEIILSRLVARPDAAPLYSEVVHLLGKLQESLVVDVKWILQGQDAVLGRKSTRQQLLTIATRRGVPIKAQVWKPWGWSSLLSDVMANRSAKRKLEAAPIEEGEVVDDSADAKRPSKSTLHINKYVTEKAFAELMLPCIDRSSPEFRSIFAGELIKQMGTVSEHIKAISRNGAKQVGLVPSGNDVSSNKSSGRKGIRGGSPNIGRRGTVGNDPTPPSASALQAIVWLRLQFIIRLLQVILADRGMRHTLAPAILSLLASRIIYEDADFPPPPASPIASRREVDSLLEPPMDVLLDRPSESLFERLLCVFHALLGNCKPSWMKSKPVSKPTVRAPSRDFPAFDNEVAVALQSALDHVELPGAIRRRIQAAMPILPPARHPSIHCQPPQLSLAALSPLQSIPSTSGPQQKSTSHSWVPTNISSRSKAVLPPQDPEMEVDPWTLLEDGTSCPSTSSGSNSASGITPDHSNLKACSWLKGAVRVRRTELTYIGSLDDDS
Length1883
PositionKinase
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.202
Instability index50.78
Isoelectric point8.38
Molecular weight207401.67
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats
>MDP30610
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.36|      14|      48|     109|     122|       1
---------------------------------------------------------------------------
  109-  122 (26.54/17.57)	LPSFVAPDVYGRGA
  160-  173 (22.81/13.89)	LATLASPNVHARGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.05|      18|      75|     330|     347|       2
---------------------------------------------------------------------------
  330-  347 (32.45/23.21)	EKKEKKD.IFES.PG.PLHDI
  404-  424 (19.59/10.50)	ERKRRHHrILKQlPGsSLFDI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     145.31|      46|      79|    1134|    1180|       3
---------------------------------------------------------------------------
 1134- 1180 (77.41/51.98)	SRSSVTFKMDNSIEVLVHWFRILLG.............................NCRTIYDGLIADIlGESYVLAL
 1187- 1261 (67.90/41.04)	LPLSVVFPPAYSIFAMVRWRQYILSredmqvyqsianainditrhqpfrdicfrNTHQLYDLLAADV.GDSEFAAM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.86|      27|      52|    1760|    1791|       4
---------------------------------------------------------------------------
 1760- 1791 (43.96/39.70)	ILPPaRHPSIHCQPPQLslaaLSPLQSIPSTS
 1814- 1840 (53.89/33.65)	VLPP.QDPEMEVDPWTL....LEDGTSCPSTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.06|      41|      79|     953|    1012|       5
---------------------------------------------------------------------------
  953- 1000 (55.04/71.05)	ASpdgdpSAVASAVSAIVV..NAGHVIAKHLDfAGGNyHGVASIGNS.LSF
 1035- 1078 (62.01/30.63)	AS.....SAVTAALAPPKVqrNQFQPSSETHD.AYGN.HTNEPLSTSgKGF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     217.99|      68|      79|     562|     634|       6
---------------------------------------------------------------------------
  525-  550 (21.39/ 7.29)	..............................................TSTLTQVD....TG..EAKIGCEDCMRINGQK
  562-  634 (97.49/95.68)	PLIQSDE.EDVWWVRKgTELQESFKaepALKSIKQTSRgRAKVVRKTQNLAQLT....TAKIEGSQGEASTSHLCESK
  642-  714 (99.11/76.18)	PSTDGDNaKDADHTRM.TNLAEVGK...SLKKLRLLER.RSISVWLLKSVRQLVegneTTACKASNSISSFSSQPEDK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.69|      37|      52|      12|      49|       7
---------------------------------------------------------------------------
   12-   49 (58.23/43.64)	ELLVPSvLIEWSCHQLQERDSVEAL..ELLLPIVLGLVET
   62-  100 (55.45/36.60)	EILVKR.LSDASAVDNPKRSSISSViaELLRYMVLAVPDT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.15|      28|      52|    1582|    1609|       8
---------------------------------------------------------------------------
 1582- 1609 (51.69/29.85)	KGIRGG.SPNI.....GRRGTVGNDPTPPSASAL
 1631- 1664 (43.46/23.88)	RGMRHTlAPAIlsllaSRIIYEDADFPPPPASPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.11|      10|      16|     789|     798|      11
---------------------------------------------------------------------------
  789-  798 (17.27/ 9.90)	NILLATDLLP
  808-  817 (18.84/11.50)	NFVLATARHP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30610 with Med12 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) HLCESKLSCPHHKPSTDGDNAKDADHTRMT
2) LVPSGNDVSSNKSSGRKGIRGGSPNIGRRGTVGNDPT
3) SPLQSIPSTSGPQQKSTSHSWVPTNISSRSKAVLPPQDPEMEVDPWTLLEDGTSCPSTSSGSNSASGIT
629
1566
1782
658
1602
1850










Molecular Recognition Features






MoRF SequenceStartStop




NANANA