<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30549
Description |
Uncharacterized protein |
Sequence | MNILSSFLTFLSILQKDENSSIEDYFGDEVLKVRACGMSFITLGINIRNGRFLLQSSKNILLPSTLVDCEEALNQGSFSATEVFTSLRSKSILNIFASTGRFLGLEVYDQSLTSLKIPNSILQVSDLLVMGFPQCANCYYLLMQVDKNFKLVFNLLESQSDQDGKSSSFGDANQIIRFSRIDIGQMKIVDDELNVSLFDWEKLHSLPNIGTFNQVGEHNIGVDAALQRPGFSQSAFSSVVDEVFDGYQGLNAGVSSSNFEGELQQSQVHKVKKVSSSLTSSSLFDEANNLKGLIQNSATGSLSSSSPVRISPIHKLSTLRSDQDISSLKPPYSADVVSAPSMTPNIIESSSLNVPRSNSSPLAKPYDNVAHKHVRKGRKQSLLDFVKLLPSFQGSEASFPQHKRRKILKLADSSSAASPSLPSIVSCRTGGCTYGDLLAEANHGITPSNLYVSVLLHVVRHCSLCIKHARLTSQMDSQDISYVEEIGLQIPSSNLWLKLPFARDDSWQRICLRLGKPGTMCWDVKINDPYFRELWELHKGSTTTLWGSGVRIANTSEIDSHICFDPEGVVLSYKSVEDDSIQRLVSDLRRLSNARLFAHGMRKLIGLGTDDSSDHITNLDLKVQTKGTGDLVDKLSEQMRKAFKIEAVGLMSLWFSYGSMPVIVHFVVEWEADKDCCTMHVSLDQLWPHTKFLEDFINGGEVASFLDCIRLTAGPLLALCGAIRPARIPVPVSAGHSLVQKQNNFMSSHGLMANPSATAIQVSSSAAATTTLMTQLGSNSLQAAAVLSATGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFAVDMRCFAGDQVWLQPATPPKRGPAAGGSLPCPQFRPFIMEHVAQGLNALEPNFSGASHAGVQLGSSNANVNSVSQPLAPNTNRRAGSAMLASSGLASGISGLPLRISPGTCFPVHVKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPDLIKEILGILRDNEGGLLNLDQEQPALRFFVGSYVFAVSVHRVQLLLQVLSLRRFHHQQQQQQQQNQSATQEELAPGEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLISWKKGLSLAHGGDIATAQRSRIELCLENHSGSVLENSETTSCSKSNIHHDRVHNLVDFALTFVLDPAHIPHMNVAGGAAWLPSCVSVRLRYSFGENAHVSFLAMEGSHGGRACWSRHEDWEKCKQRMTRAAEYANGNSAGDASQGRLRLVADALQRTLQVALQQLRDCSLSSSSIGT |
Length | 1288 |
Position | Tail |
Organism | Musa acuminata subsp. malaccensis (Wild banana) (Musa malaccensis) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Zingiberales> Musaceae> Musa.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.081 |
Instability index | 51.29 |
Isoelectric point | 7.57 |
Molecular weight | 140606.58 |
Publications | PubMed=22801500
|
Function
Annotated function |
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP30549
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.34| 16| 23| 326| 344| 1
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326- 344 (25.88/25.60) SSLKPPYSAdvvSAPSMTP
350- 365 (29.46/19.28) SSLNVPRSN...SSPLAKP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 119.15| 39| 42| 237| 276| 2
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237- 276 (60.05/45.68) SSVVDEVfDGYQGL..NAGVSSSNFEGELQQSQVHKVKKVSS
281- 321 (59.10/39.40) SSLFDEA.NNLKGLiqNSATGSLSSSSPVRISPIHKLSTLRS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 103.42| 23| 23| 474| 496| 3
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474- 496 (39.25/22.51) QMD.SQDISYVEEIGLQI..PSSNLW
498- 522 (30.74/16.09) KLPfARDDSW.QRICLRLgkPGTMCW
523- 546 (33.43/18.12) DVK.INDPYFRELWELHK.gSTTTLW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 99.71| 28| 386| 781| 812| 4
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785- 812 (50.22/31.69) AVLSATG..RGGPGLVPSSLLP...FDVSVVLR
914- 942 (27.07/ 7.22) AMLASSGlaSGISGL.PLRISPgtcFPVHV...
1187- 1201 (22.43/ 6.77) ..........GGAAWLPSC........VSVRLR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 137.32| 38| 119| 709| 749| 5
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709- 749 (64.04/45.15) IRLTAGPLLALCGAIRPARIPvpvSAGHSLVQKQ.NNFMSSH
829- 867 (73.28/44.01) MRCFAGDQVWLQPATPPKRGP...AAGGSLPCPQfRPFIMEH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.21| 15| 706| 405| 427| 10
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387- 401 (26.71/14.44) KLLPSFQGSEASFPQ
409- 423 (24.50/13.43) KLADSSSAASPSLPS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.23| 23| 42| 961| 1001| 12
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961- 987 (35.77/47.04) GGWVPLAALKKVLRgilkYLGVLWLFA
1005- 1027 (40.46/15.70) GGLLNLDQEQPALR....FFVGSYVFA
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