<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30521

Description Uncharacterized protein
SequenceMERSVDEMSNEFDEVLAAAADVIQAREASFGLRTAATDAALEKFRQRWGLFKLSCDRAEDVVDSARRSIMAERLMDAASGMAPGQPETAGLQHLNVPRFERALHKVNSVAADLGRGSAAMAAASSSGPSAATPSDSFGVATQIRDAGGGRNRHRLGRRIGKRLRFGILSNELRFRCAASTPPGKSGNPNLPVDLVSSARGTVIKQISGKLDNKDPKHLASSFTNYRDDPLVDKQRTQLGVIRSIPSPPINRNIAGFFVLFFLVGVAFDKVWNLRKREKSARDVDNGTWPQAPTSLSIFLEKDLRRKESVEWVNMVLGKLWKVYRSRIEDWVIGLLQPVIDNLKKPDYVQRVEIKQFSIGDEPLSVRSVERRTSRGVNDLQYQIGIRYTGGAQMLLSLSLNFGIIPIVVPVGIRDFDIDGELWVKLRLIPTGPWIGAVSWAFVSLPKIKFELSPFSLFNLMAIPVLSMFLTRLLTEDLPRLFVLPKKIVLDFQKGKALGPVSHDFKVEAVQERSKDFVGELSVTLVDARKLAYPKIGKTDPYVVLTLGDQVFQSKKNSQTTVTGPPGEPIWNQDFDLFVVNPGKQKLYIQVKDSFGFADFTVGTAEVELESLQDTVPADRVVALRGGWSLFRNKSSGEVLLRLTYKAYVEDEEDDLLEAEFVDDHAPDDISDYDQPNGTFEQSGYPSGKEREAFMDVLAALIVSEEFQGIVTSETENSEVTGESRNVTSPVSTTIGLTDETSTIDSNRSSSSSDDLELVWLAVVTVTVVLIARTMGDSSLFNP
Length782
PositionTail
OrganismMusa acuminata subsp. malaccensis (Wild banana) (Musa malaccensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Zingiberales> Musaceae> Musa.
Aromaticity0.08
Grand average of hydropathy-0.203
Instability index37.79
Isoelectric point5.59
Molecular weight86427.20
Publications
PubMed=22801500

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
lipid binding	GO:0008289	IEA:UniProtKB-KW

GO - Biological Process
lipid transport	GO:0006869	IEA:UniProtKB-KW









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30521
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     135.57|      42|     100|     379|     425|       1
---------------------------------------------------------------------------
  379-  425 (64.71/56.48)	LQYQIGIRYTGGaQMLLSLSLNFGiipiVVPVGIRDFDIDGELWVKL
  483-  524 (70.86/46.64)	LPKKIVLDFQKG.KALGPVSHDFK....VEAVQERSKDFVGELSVTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.18|      19|      22|     310|     328|       7
---------------------------------------------------------------------------
  310-  328 (36.20/23.85)	EWV....NMVLGKLWKV.YRSRIE
  329-  352 (25.98/15.22)	DWVigllQPVIDNLKKPdYVQRVE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30521 with Med32 domain of Kingdom Viridiplantae
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