<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30521

Description Uncharacterized protein
SequenceMERSVDEMSNEFDEVLAAAADVIQAREASFGLRTAATDAALEKFRQRWGLFKLSCDRAEDVVDSARRSIMAERLMDAASGMAPGQPETAGLQHLNVPRFERALHKVNSVAADLGRGSAAMAAASSSGPSAATPSDSFGVATQIRDAGGGRNRHRLGRRIGKRLRFGILSNELRFRCAASTPPGKSGNPNLPVDLVSSARGTVIKQISGKLDNKDPKHLASSFTNYRDDPLVDKQRTQLGVIRSIPSPPINRNIAGFFVLFFLVGVAFDKVWNLRKREKSARDVDNGTWPQAPTSLSIFLEKDLRRKESVEWVNMVLGKLWKVYRSRIEDWVIGLLQPVIDNLKKPDYVQRVEIKQFSIGDEPLSVRSVERRTSRGVNDLQYQIGIRYTGGAQMLLSLSLNFGIIPIVVPVGIRDFDIDGELWVKLRLIPTGPWIGAVSWAFVSLPKIKFELSPFSLFNLMAIPVLSMFLTRLLTEDLPRLFVLPKKIVLDFQKGKALGPVSHDFKVEAVQERSKDFVGELSVTLVDARKLAYPKIGKTDPYVVLTLGDQVFQSKKNSQTTVTGPPGEPIWNQDFDLFVVNPGKQKLYIQVKDSFGFADFTVGTAEVELESLQDTVPADRVVALRGGWSLFRNKSSGEVLLRLTYKAYVEDEEDDLLEAEFVDDHAPDDISDYDQPNGTFEQSGYPSGKEREAFMDVLAALIVSEEFQGIVTSETENSEVTGESRNVTSPVSTTIGLTDETSTIDSNRSSSSSDDLELVWLAVVTVTVVLIARTMGDSSLFNP
Length782
PositionTail
OrganismMusa acuminata subsp. malaccensis (Wild banana) (Musa malaccensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Zingiberales> Musaceae> Musa.
Aromaticity0.08
Grand average of hydropathy-0.203
Instability index37.79
Isoelectric point5.59
Molecular weight86427.20
Publications
PubMed=22801500

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
lipid binding	GO:0008289	IEA:UniProtKB-KW

GO - Biological Process
lipid transport	GO:0006869	IEA:UniProtKB-KW









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30521
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     135.57|      42|     100|     379|     425|       1
---------------------------------------------------------------------------
  379-  425 (64.71/56.48)	LQYQIGIRYTGGaQMLLSLSLNFGiipiVVPVGIRDFDIDGELWVKL
  483-  524 (70.86/46.64)	LPKKIVLDFQKG.KALGPVSHDFK....VEAVQERSKDFVGELSVTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.18|      19|      22|     310|     328|       7
---------------------------------------------------------------------------
  310-  328 (36.20/23.85)	EWV....NMVLGKLWKV.YRSRIE
  329-  352 (25.98/15.22)	DWVigllQPVIDNLKKPdYVQRVE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30521 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MAAASSSGPSAATPSDSFGVATQIRDAGGGRNRHRL
2) TSETENSEVTGESRNVTSPVSTTIGLTDETSTIDSNRS
120
711
155
748










Molecular Recognition Features






MoRF SequenceStartStop




NANANA