<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30514

Description Uncharacterized protein
SequenceMVAVKAAEERGDPPLLRAVEAARCVQERGLGLPNPELGRVLVSNLCFANNNPSLWKLLDQTMASCVVSPIHALALLTPRQGCDPDDLLDRSLVTPHRRTQPEAYRLYLVLLSRYALSSLSVEAGSCRDKIAKSVDDALQLSDTYGVKKMDFGHAVVLFIMTVITILIDCTIEDYGLRLVSTDKHGSVCANGGKQVMELDVKGNSYDKRNEHREHLRRTNALLAIEVAEKISSNKKTKAFLHLIHINMYATSTELLLNKHQLLGALADAGPSSLNSCNSSGAGRDACWIPIDILMENAMDGKHLYAISAVEVLTELTKTLKVINQASWQETFQALWVSALRLVQRDREPLEGPIPHLDARLCMLLSIVPLAIVAVVKEELDIRYPVNNGFLRSNSHENEGNKFSSRRHGLISSLKMLGQFSALLLPPPSVVNAANNAATKAAVFVSNYKAGNNNLNVVGHNDSSIKAVGNMLHLIVEACIARNLIDTSAYFWPGYVGPSALSRDSTSVQDSPWSTFLEGAPLNGSLKNSLMVTPASSLVELEKMYHIAVNGSEEEKLAAAKILCGASLVRGWNVQEHVVHIVVKLLSPPIPPDSSASGVGNYLIGHMSVLSAILFGVSCVDIVHILSLYGMVPEVAAALMPLCEAFGSLTPLSSHRSSTSEEPSVYTVFSCAFLFLIRLWKFYKPPQEHCIAGRGGSMRMELTLDYLLLMRNIYIDSFPKLRAWYFQNQACIASTLSGLCSKNPVHQVANKILSMICRKMSITGPVSGNPSSNSSSSISGSPVSTSDDSFQRPMLPAWEILEAVPFVLEAILTACAHGRLSSRELTTGLRDLVDFLPASLATIISYFSAEITRGIWKPVPMNGIDWPSPSPTLLSTESEIKEILASAGVHIKSCYPRGMPPMLPLPMAALVSLTITFKLDKSVEYIHGVVGQALENCATGCTWPSMPIIGALWTQKVRRWHDFIVLSCSRSPFSRDKDAVAQLIRSCFTSFLGPSVVGGSHITAHRGVNGLLGQFMSDQGVRLPIAPGFLYLRTCRTFHDTHFVNEVIFKLVIEWAHKLANEWASDGPAHLKSSRISLAAAASGVQQVATLGTCLLCIAGGVEMVQVLYEETLPTMLLSAGGEKLGGAGPVSNILQGYALAYMLILCGALVWGVGNTSPAYASVFSSRRARVIGIHMDFVTGAVEGNIILRCDPATWKAYVSCFVGLLVKFAPAWVHEVKQETLRKLASGLRGWHECDLALSLLERGGPSSMTAVVEYML
Length1259
PositionTail
OrganismMusa acuminata subsp. malaccensis (Wild banana) (Musa malaccensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Zingiberales> Musaceae> Musa.
Aromaticity0.07
Grand average of hydropathy0.171
Instability index48.26
Isoelectric point7.69
Molecular weight136771.99
Publications
PubMed=22801500

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30514
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     203.74|      69|     406|     761|     845|       1
---------------------------------------------------------------------------
  761-  845 (98.26/100.55)	ITGPVSGNPSSNSSSSISGSPVSTSDDSFQRpMLPAWeileaVPFVleailtacAHGRLssRELTTGLR.....DL.VDFL....PASLATIISY
 1179- 1257 (105.47/68.93)	VTGAVEGNIILRCDPATWKAYVSCFVGLLVK.FAPAW.....VHEV........KQETL..RKLASGLRgwhecDLaLSLLerggPSSMTAVVEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.14|      19|     406|     689|     708|       2
---------------------------------------------------------------------------
  689-  708 (32.37/25.33)	CIAGrGGSM...RMELTLDYLLL
 1096- 1117 (31.77/19.51)	CIAG.GVEMvqvLYEETLPTMLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     149.24|      46|     407|      40|      91|       3
---------------------------------------------------------------------------
   40-   91 (71.14/70.14)	VLVSNLCFANNNPSLWKLLDQTMAScVVSPIHALAlltprQGCDPDDLLDRS
  442-  487 (78.10/56.82)	VFVSNYKAGNNNLNVVGHNDSSIKA.VGNMLHLIV.....EACIARNLIDTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.35|      21|      77|     939|     961|      17
---------------------------------------------------------------------------
  939-  961 (41.33/31.53)	GCTWPSMPiiGALWTQKVRRWHD
 1019- 1039 (41.02/24.89)	GVRLPIAP..GFLYLRTCRTFHD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.83|      15|     580|     556|     573|      18
---------------------------------------------------------------------------
  556-  573 (20.50/24.51)	LAAAKILCGAsLVrgWNV
 1139- 1153 (31.33/20.67)	LAYMLILCGA.LV..WGV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30514 with Med33 domain of Kingdom Viridiplantae
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