Description | Med6 domain-containing protein |
Sequence | MHVLHAQLRDPGFIYRNLSFWRMKTRRKMTIIILTTSGTRMSYFGFLTDTSFWAYSCIICISVVLRSIGRLLSEPTLTITYTMATPADDHSEKVLVYHEWLNVRNVLEYFAACQLFWDPQCNNNILRMQSQHLGTSVNLDELKWVSQRDRVCSGPCRTANLVYNSQEGEAQPDRKIPFTKLSTSILLCQTDSSVPLGRAQLTVLKCNFQSTAVNCLSDSLSLIRPYKPEFSPRTGYQWWALRHQSYFHLAFTILRNIIDDSVEEGDDSNTNQLRNQPKRQVATIPGMMAALQTTRSHMEQQYQEKQKRAEQEAAANAVASSGTAPGTRPASVAPMTPAPDAIPRPPDADASAIASASKTPAPKGQGKKKQKRKWILTGEESVLNVIYRIVYGRRKGCPVKIPI |
Length | 403 |
Position | Head |
Organism | Thanatephorus cucumeris (strain AG1-IA) (Rice sheath blight fungus) (Rhizoctonia solani) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Cantharellales> Ceratobasidiaceae> Rhizoctonia> Rhizoctonia solani AG-1. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.367 |
Instability index | 47.65 |
Isoelectric point | 9.47 |
Molecular weight | 45432.59 |
Publications | PubMed=23361014 |
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP30478 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 34.76| 9| 30| 12| 21| 1 --------------------------------------------------------------------------- 12- 21 (15.20/13.77) GFIyRNLSFW 45- 53 (19.56/11.39) GFL.TDTSFW --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 42.89| 13| 29| 156| 171| 2 --------------------------------------------------------------------------- 156- 171 (18.40/18.78) CRTANLVynsQEGEAQ 188- 200 (24.48/14.38) CQTDSSV...PLGRAQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 131.47| 32| 63| 277| 308| 3 --------------------------------------------------------------------------- 277- 308 (55.05/32.76) PKRQVA...TIPGMMAALQTTRSHMEQQYQEKQKR 314- 341 (28.44/13.64) AANAVAssgTAPGTRPA...SVAPMTPAPDA.... 343- 372 (47.98/27.69) PRPPDA...DASAIASASKTPAP..KGQGKKKQKR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) QGKKKQKRKWILT 2) VIYRIVY | 365 385 | 377 391 |
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