Description | RNA polymerase i activation mediator protein |
Sequence | MGVQPRPPQQRTLSSSGLSVQRPTHQRTLSQQYLPQSPVRKENLIDLTGADNDAAVAQNRYGTLPRRGGSRLKLELSNDAMLPQHHPSDSPNILTPNHPPDAQDRARKPHRHELAGLRKRPTHRHSPAPVVAVKKDGRPKPYHLETPAAAPRYAPFGKPRSDATAKQGFGAGGGARDSQDLGHADFFPWTGNHPEDQWSETIIKNGYFDKPPATTAETTSAKAALFPALKHKTGLNLLSNIFTGILNQRKLNGQISSPSTFKPPPRVTLTDTKREMWLRDLANPSISLRRLSRTIPHGIRGKVLLDHCLNKNVPTERAVWLVKCVGANEIRSVKRKGTGPNGPFVVTGEAKWLRDWTVFVEQFVEGVSTAFGDNDWKAKVQYAIRLATHLYAEQLLERDHYMDWLVSGLENSTQAKLPMWILITQIYWKDLLRLRRYGRRLVNALLGHLNTIHNDPDRDILIQLTMRLTSLLIPLVSSHPDNFVAPATWFKYRDALLASIPIDNDFAQTAFKSINSRNEQLCWIVSEDKSMIVRTLLEWCTSPHRPGAAKVYITASLLRAWIPTGLDVTTAILEFLSKCPPTEPNAKKTFHMLVSEIARSGDFQFQGYVFWLIARGGLREPSDTEREGSCATRLLVDLPLHALDPASLATRASLLRRATYDVNDEAEDINTALKCIQHAMGLPLPPGDPILQRKPVSLGKLCRLISNSNRALQTEVGARLLQIFTTETVMTKNGPQVSVPMFNFARAVLEAASDFSVLAEIVKVVIRVSNPEILASCADTVNVHLPIFAALGVGKELFDVLLERLKVVGEEQGVAARPLLASLANLAARLPGLTNTATHLRKELHQCDRNTAIDACSPVSDNMAGRLQDTEGELHEEIEKLLTSGTSVDRPTMDRLFQTVVSRLESSWSNSPERQRAYSALLGRLRIFDTQHFDLRMTDWVHHVSALKSRPGLADIYPLLISIGCLTLPILLTTTTVDSSSVARNPAAPVNSTTTYMQEVLSLCVMPLTLKTALTPEETYRFYIQQKVAPRQNHKDMVILVRNALVEYARLQSQPGISLPLSNSACGDNMLELLKLLVLLDAPSVVQSLGTKTADPALSGLFAQITTKLLMPGAQDGTPLSFETVLELANEFTLPFCQLKLSIGLPADTTTSPGGGEQAMSQFDMFSRAMDRAVSANNVMWTSMLPYLNEEVTEHLKRQAHLRFLGLFPSQKNPSASDPLSQDSIQLAGSLLSVVEAIVRGRPAPRTSQLTSGMVEKLSELWEILAAGGDGKRELRASILRHWLPALLKFITLHTNANEAAPVPAQGANMKPPTSTTAFEIRGRILIVLAGLTLELDGLALEEPQTGRPLSQQVFDLALLLVDCLPDDTRLQCVRVLLTNGTPQNPASSDARLRYLFSQMAPPTDQFVLAHRQQPTTQQAGPPRLKVPISMQGTDKLTPFTYRRWEMLSEPTPNIGENDTALSLTLFEAIKIQ |
Length | 1473 |
Position | Kinase |
Organism | Colletotrichum fructicola (strain Nara gc5) (Anthracnose fungus) (Colletotrichum gloeosporioides (strain Nara gc5)) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Glomerellales> Glomerellaceae> Colletotrichum> Colletotrichum gloeosporioides species complex. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.222 |
Instability index | 43.12 |
Isoelectric point | 8.96 |
Molecular weight | 162833.06 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP30386 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 246.72| 81| 95| 17| 101| 1 --------------------------------------------------------------------------- 17- 64 (56.16/33.50) .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GLSVQRPTHQRTLSQQYLPQSPVRKENLIDLTGADNDAAvaQNRYGTL 65- 156 (124.73/79.96) PRRGGS.RLKLELSNDAMLPQH..HPSDSPniLTPNHPPD.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aqdrarkphrhelaGLR.KRPTHRHSPA....PVVAVKKDGRPKPYHLETPAA..APRYAPF 159- 196 (35.96/14.88) PRSDATaKQGFGAGGGARDSQDlgHADFFP..WTGNHPED..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1338- 1372 (29.87/10.30) ........................................qwsetiikngyfdkppattaettsakaalfpalkhktglnllsniftgilnqrklngqisspstfkppprvtltdtkremwlrdlanpsislrrlsrtiphgirgkvlldhclnknvpteravwlvkcvganeirsvkrkgtgpngpfvvtgeakwlrdwtvfveqfvegvstafgdndwkakvqyairlathlyaeqllerdhymdwlvsglenstqaklpmwilitqiywkdllrlrrygrrlvnallghlntihndpdrdiliqltmrltslliplvsshpdnfvapatwfkyrdallasipidndfaqtafksinsrneqlcwivsedksmivrtllewctsphrpgaakvyitasllrawiptgldvttaileflskcpptepnakktfhmlvseiarsgdfqfqgyvfwliargglrepsdteregscatrllvdlplhaldpaslatrasllrratydvndeaedintalkciqhamglplppgdpilqrkpvslgklcrlisnsnralqtevgarllqifttetvmtkngpqvsvpmfnfaravleaasdfsvlaeivkvvirvsnpeilascadtvnvhlpifaalgvgkelfdvllerlkvvgeeqgvaarpllaslanlaarlpgltntathlrkelhqcdrntaidacspvsdnmagrlqdtegelheeieklltsgtsvdrptmdrlfqtvvsrlesswsnsperqraysallgrlrifdtqhfdlrmtdwvhhvsalksrpgladiypllisigcltlpillttttvdsssvarnpaapvnstttymqevlslcvmpltlktaltpeetyrfyiqqkvaprqnhkdmvilvrnalveyarlqsqpgislplsnsacgdnmlellkllvlldapsvvqslgtktadpalsglfaqittkllmpgaqdgtplsfetvlelaneftlpfcqlklsiglpadtttspgggeqamsqfdmfsramdravsannvmwtsmlpylneevtehlkrqahlrflglfpsqknpsasdplsqdsiqlagsllsvveaivrgrpaprtsqltsgmveklselweilaaggdgkrelrasilrhwlpallkfitlhtnaneaapvpaqganmkpptsttafeirgrilivlagltleldGLALEEPQTGRPLSQQVFDLALLLVDCLPDDTRLQ............. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 247.19| 84| 102| 1100| 1195| 2 --------------------------------------------------------------------------- 1100- 1195 (119.30/112.98) GLFAqiTTKllMPGAQDgtPLSFETVlELANEFtLPFCQlKLSIGLPADTTTS.PGGGEQAMSQ.FDMFSRAMD..RAVSANNV.MWtsmLPYLNEEVTEH 1206- 1294 (127.89/81.41) GLFP..SQK..NPSASD..PLSQDSI.QLAGSL.LSVVE.AIVRGRPAPRTSQlTSGMVEKLSElWEILAAGGDgkRELRASILrHW...LPALLKFITLH --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 148.38| 49| 101| 528| 584| 3 --------------------------------------------------------------------------- 528- 584 (79.68/60.43) DKSMIVRTLLEWctsP.HRPGAAKVYITASLLRAWI....PTGLDVTTAIleflsKC.........PPTEP 627- 689 (68.70/36.51) EGSCATRLLVDL...PlHALDPASLATRASLLRRATydvnDEAEDINTAL.....KCiqhamglplPPGDP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 106.42| 34| 101| 947| 982| 4 --------------------------------------------------------------------------- 947- 982 (53.49/43.26) LKSRPGLAdiYPLLISI.GCLTLPILLTTTTVDSSSV 1051- 1085 (52.93/35.68) LQSQPGIS..LPLSNSAcGDNMLELLKLLVLLDAPSV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 82.63| 23| 101| 387| 421| 6 --------------------------------------------------------------------------- 387- 409 (41.99/46.25) ATHLYAEQLLERDHYMDWLVSGL 423- 445 (40.64/18.34) ITQIYWKDLLRLRRYGRRLVNAL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) FTYRRW 2) GLRKRP 3) KPYHLETPA | 1440 116 140 | 1445 121 148 |
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