<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30292

Description Uncharacterized protein
SequenceMSYTGSLQNKNDPLLSVSDGEGPSLHFRWWYIVRLLQWNHAEGLLHPSLVIDWVFNQLQEKDLLEVWQLLLPIIYGFLETIVLSQTYVRTLAGLALHVIRDPAPGGSDLVDNSRRAYTAYAVIEMLRYLILVVPDTFVALDCFPLPSSVISHTMNDGNFVLKSTEAAGKIKNSSDDFGHIISCIQKHTEDLVKAASPGYPGHCLAKVAKALDKALVLGDLRVAYKFLFEDLCGGTVSEGWISKVSPCLRLSLKWFGTVNTPLIYSVFFLCEWATCDFRDFCSTPPRDIKFTGRKDLSQVHIAVRLLKMKIRDVKISQKQTNENHRASHLAKHSSQRHNWNYVGNVSRLRSSSKSTGSSVFESPGPLHDIVVCWIDQHVVQKGEGPKRLNLFMVELIRAGIFYPLAYVRQLIVSGIMDVNVNVVDLERQRRHYRILKQLPGCFIHDVLEESGIVEGSQLKEALQIYLNERRLILRGHLSVSCGSNLSALKKKKYPASTKDEVFAVPIDQRNVISTTISSKNAKDTNIEELRTAISVLLQLPNCSSNLSTTGDESEGSDRRAIGSPYGKIDPVEGTPGCEECSRAKRQRLSEERSTFVQGHSPVQSDDDDTWWVKKGMKSPEPLKVDQPQKSTKQVTKSRLKNVRKTQSLAQLAASRIEGSQGASTSHVCGNRVSCPHHKTAMDGDGQRSVDSIRTSHFGDIVSIGKALKQLRFVEKRAIAAWLLTVVRQVIEDVEKNIGKVGQFSKPFPVVDDRGSIQWKLGEDELSVILYLMDISDDLVSVVKFLLWLLPKVLNSPNSTIHSGRNVVMLPRNVENQVCDVGEAFLLSSLRRYENILVAADLIPEALSSAMHRVATVIASNGRVSGSGALAFARYLLRKYSNVASVIEWEKTFKTTSDARLSSELESGRSVDGELGLPLGVPAGVEDHDDFFRQKISGGRLPSRVGAGMRDIVQRNVEEAFHYLFGKDRKLFAAGTPKGPTLEKWDNGYQIAQQIVMGLIDCIRQTGGAAQEGDPSLVSSAVSAIVGSVGPTLAKMPDFSSGNSHSNTMPATNALNYARCILQMHIACLCLLKEALGERQSRVFDIALATEASNALAGVFSPSKASRSQFPMSPEAHDSSNTISNDMGSNSSKVVAKTTKIAAAVSALLVGAIIYGVTSLERMVTVLRLKEGLDVVQFVRSTRSNSNGNARSLMAFKVDNSIEVHVHWFRLLVGNCRTICEGLVVELLGEPSIMALSRMQHMLPLNLVFPPAYSIFAFVRWRPFILNATVREDMNQIYQSLTMAITDAIKHLPFRDVCFRDCQGLYDFMAADASDSEFATLLEFNGSDMHLRSTAFVPLRSRLFLNAMIDCKMPQSIYTKDDGSRMSGPGESKIKFTDSESKLQDMLVHVLDTLQPAKFHWQWVVLRLLLNEQALIEKLENRDVSLADAIKLSSPSTEKAAAASENEKNFIQILLTRLLVRPDAAPLFSELIHLFGRSLEDSMLSQAKWFLAGQDVLFGRKTIRQRLHNIAVKKNLSVKTQFWEPWGWCSLSTDPLTVKGDNKKFDSTSLEEGEVVEEGMDLKRCQLQVTERALIEMLLPCIDQSSDESRNSFASDMVKQLSYIEQQITAVTGGSKSVGSAPPGVEGQPNKVNNRKNMRGGSPALTRRQTVATDSSPPSPAALRASMSLRLQLLLRFLPILCTDREPSVRSMRQFLATVIFRLLGSRVVHEDVDISVNAVPSLSIREAESSSEVASAAFVDSSSGSLFDRLLLVLHGLLSSYPPSWLRAKPVSKTISEPTREISGIDRELLETLQNDLDRMQLPDTIRWHIQAAMPILIPSMRCSLSCQPPSISNSALVCLQPSITNPGSNSSSSTIPQRNPVLSRVASNASGKSKQQDNDLEIDPWTLLEDGTGSYSSAGNTASIGSGDHANIRATSWLKGAVRVRRTDLTYVGAVDDDG
Length1940
PositionKinase
OrganismGlycine max (Soybean) (Glycine hispida)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Glycine> Glycine subgen. Soja.
Aromaticity0.07
Grand average of hydropathy-0.159
Instability index49.09
Isoelectric point8.42
Molecular weight214273.73
Publications
PubMed=20075913

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30292
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.08|      32|     140|     798|     839|       1
---------------------------------------------------------------------------
  800-  839 (46.58/50.11)	IHSGRnvvmLPRNVENQVCD.....VGEAF..LLSSLRRyeniLVAA
  935-  973 (47.50/24.74)	ISGGR....LPSRVGAGMRDivqrnVEEAFhyLFGKDRK....LFAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     192.76|      64|     140|     294|     363|       3
---------------------------------------------------------------------------
  294-  363 (97.66/70.23)	KDLSQVHIAVRLLKMKIrdVKISQ.K...QTNENHRASHLAKHSSQRHNwnyvGNVSRLRSSS..KSTGSSVFESP
  436-  505 (95.10/53.34)	KQLPGCFIHDVLEESGI..VEGSQlKealQIYLNERRLILRGHLSVSCG....SNLSALKKKKypASTKDEVFAVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.12|      31|      64|    1341|    1372|       4
---------------------------------------------------------------------------
 1341- 1372 (51.71/42.04)	RLFLN..AMIDcKMPQSIYTKDDGSRMSGPGESK
 1406- 1438 (44.41/29.42)	RLLLNeqALIE.KLENRDVSLADAIKLSSPSTEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.02|      24|     363|      17|      47|      10
---------------------------------------------------------------------------
   17-   47 (33.96/42.03)	VSDGEGPS.LHFrwwYIVRLLQwnhaEGLLHP
  379-  403 (40.06/23.52)	VQKGEGPKrLNL...FMVELIR....AGIFYP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.98|      19|     363|    1375|    1393|      11
---------------------------------------------------------------------------
 1375- 1393 (34.03/17.71)	FTDSES.KLQDMLVHVLDTL
 1738- 1757 (28.95/14.09)	FVDSSSgSLFDRLLLVLHGL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30292 with Med12 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GSKSVGSAPPGVEGQPNKVNNRKNMRGGSPALTRRQTVATDSSPPS
2) GSNSSSSTIPQRNPVLSRVASNASGKSKQQDNDLEIDPW
3) LSEERSTFVQGHSPVQSDDDDTWWVKKGMKSPEPLKVDQPQKSTKQVTKSRLKN
1613
1848
588
1658
1886
641










Molecular Recognition Features






MoRF SequenceStartStop




NANANA