<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30268

Description Uncharacterized protein
SequenceMQRHCTELTERLLQSLDEEYNVVDMGVVVDVITALEKTTITKEVLEITRLGRYVNELRRKTHNQVLAKRAKELVRRWRNALVPSANATPQPPVADTAPPALNGANAPSPALRCLEPQSPALRGLKPQSPLMRTTSLSRVSSPLLHSDQSHSPVVSPNKPQVTATNNHRLNSNTAQVDVKFGSQNHSSEAVPRTHSSNKRLRKDEPVLANVDVSNKKQRLNGESVCGSNENLQVPSPTFNEKTSELVEPSSSTESNVVKKRGRKKGSKSIKNQVSVEDSVKEKLASISRNKKLKTTQELLADLQARGSNANANLLPSHSVNQPKVENNLRTKNNEDLCKYLSGNQNNSLHKKATDVRTQQQKSGKRQENTCHSSQQKYPEPDVSDQDTVDSEITSENNGRLPQELTVEEILAKLPPLDRSSIDWGSGDEYCSDNENETKKVREVTEEDLDRLHNECIEGLNGNFQPRLSFGNISETEKTCEDEVKLDSVIGLRRRSDSHKDEVFREWHEMLAKPSFDGQILHILPYVIID
Length529
PositionUnknown
OrganismNasonia vitripennis (Parasitic wasp)
KingdomMetazoa
Lineage
Aromaticity0.03
Grand average of hydropathy-0.874
Instability index63.76
Isoelectric point7.64
Molecular weight59157.33
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30268
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.86|      32|      32|     147|     178|       1
---------------------------------------------------------------------------
  115-  142 (24.42/ 8.86)	.EPQSPALRGLKPQsplMRTTSLSRVSSP.........
  147-  178 (56.87/29.16)	DQSHSPVVSPNKPQ...VTATNNHRLNSN...TAQVDV
  182-  212 (40.58/18.97)	SQNHSSEAVP.R......THSSNKRLRKDepvLANVDV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.62|      33|      35|     354|     386|       2
---------------------------------------------------------------------------
  354-  386 (59.30/34.35)	DVRTQQQKSGK.RQENTCHSSQQKYPEPDVSDQD
  389-  422 (50.32/28.13)	DSEITSENNGRlPQELTVEEILAKLPPLDRSSID
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.75|      14|      15|      50|      63|       3
---------------------------------------------------------------------------
   50-   63 (24.61/17.28)	LGRYVNELRRKTHN
   66-   79 (24.14/16.80)	LAKRAKELVRRWRN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.87|      16|      35|     433|     449|       5
---------------------------------------------------------------------------
  433-  449 (22.87/15.78)	NENETKKVREvTEEDLD
  471-  486 (28.01/15.19)	NISETEKTCE.DEVKLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.51|      19|      22|     310|     331|       6
---------------------------------------------------------------------------
  310-  331 (28.24/24.20)	NANLLPSHSVNQpkvENNLRTK
  333-  351 (33.27/19.47)	NEDLCKYLSGNQ...NNSLHKK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30268 with Med26 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) RNALVPSANATPQPPVADTAPPALNGANAPSPALRCLEPQSPALRGLKPQSPLMRTTSLSRVSSPLLHSDQSHSPVVSPNKPQVTATNNHRLNSNTAQVDVKFGSQNHSSEAVPRTHSSNKRLRKDEPVLANVDVSNKKQRLNGESVCGSNENLQVPSPTFNEKTSELVEPSSSTESNVVKKRGRKKGSKSIKNQVSVEDSVKEKLASISRNKKLKTTQELLADLQARGSNANANLLPSHSVNQPKVENNLRTKNNEDLCKYLSGNQNNSLHKKATDVRTQQQKSGKRQENTCHSSQQKYPEPDVSDQDTVDSEITSENNGRLPQELTVEEILA
78
411










Molecular Recognition Features






MoRF SequenceStartStop




1) LVRRWRNALV
73
82