<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30248

Description Uncharacterized protein
SequenceMESKVTSKTSSLKALLLRAWRERWSDLQWGINIKTILPRGVSGDVHNLADCILQQALVGPGPNELVLSYLKHSLCSQLVSYAAVLQRISKYDAFHKPHCIASLLEFLEMIHVGITCRGKPEEDLLAAACLSIVHWLLQCYYYALTKVPQAPPLAPQPSELMDKPAYLLKELLASDFICAMLYSAKHDNKDLYIYIVKKCQEIEKEQQKSNTKCSIPIEDSLKKLCNLEIENIVSKFVKVDAEPITYCLQPLLAVQNLVNPSTETSIYISQLHMIQRLKNYSNARLYCEVIRACMMCLHDVTGSLKESHWGGFTVLKLPQILKELHASTLSENESFEYSQDVLDAFELLLRYTPLLDKMDIIWAGNSVQFLLNELQKVNLVTEKQTIQISSRRDGLLTPLQKFDPEKSIRTVIMRAEPTLAGFLKTLNAEYTKIQDALLSIFFQVLSGNSFELMLSVATVEGKLKIFVSRLIKFNEFSKQVGEVPGKTPTTRALLFEISFLMLCSIVQTYGPEIVLEEGGDSFFEQWVRDCMPLKDKPKSPYKMLQNLDTTKVDMLLSQITSGDSDLKSSNTNWQVSCQSAMGVAKELLYAWESGVLSAADVKRALNGLRAASFCLPVCAAAWLCAYMSITHQESLLKPANMVQQFISPIANDEMQDNYKERSSFMFQIIRKMQYDYSLPSQTKTKVLTVSHSITSKYPILEQLQQIWQGIYQRGWINIQATQSLESLLKTGGPLWFVSNLVKELLKIQYQEELDRSLDLIFAILHLDIENSTLDLINNVLPQYLYNSLQGKKLIEPQSSALAKLCVYCIFSSLEYSNNSPQQTNSRKRARKDIDPDDMDIGMPAAKLLRLNEAIDANSMFSSSSPQAQGTSNGQKSIVLRDPLLSALNGLFTNFNFLAGRNGEVSQHTHFILQFLQLTVLCGKDRARLVLQKMPQTLVPSLLKALPEFFTTDLLLRLYDVQTIMGRKAIARDLCMLRNIQLKPTK
Length985
PositionTail
OrganismNasonia vitripennis (Parasitic wasp)
KingdomMetazoa
Lineage
Aromaticity0.08
Grand average of hydropathy-0.062
Instability index44.39
Isoelectric point8.01
Molecular weight111377.24
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30248
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.73|      21|      92|      45|      65|       1
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   45-   65 (39.19/23.61)	VHNLADC.......ILQQALVGPGPNEL
  133-  160 (35.54/20.69)	VHWLLQCyyyaltkVPQAPPLAPQPSEL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     115.64|      37|     477|       4|      44|       3
---------------------------------------------------------------------------
    4-   44 (57.73/45.39)	KVTSKTSSLKALLLR.AWRERWSDLQ.WGINIktILPRGvsGD
  482-  520 (57.91/34.14)	EVPGKTPTTRALLFEiSFLMLCSIVQtYGPEI..VLEEG..GD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     369.08|     124|     162|     563|     698|       6
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  563-  698 (191.73/148.70)	DSDLKSSNTNWQVScqsamGVAKELL.YAWESGVLSAADVKRALNGLRAASFCLPVCAAAwLCAYMSITHQ.ESLLKP.....ANM.VQQFISPI...ANDEMQDNYKERSSfmfQIIRKMQYDYSLPSqtkTKVLTVSHSI......TSKYP
  725-  865 (177.35/108.52)	ESLLKTGGPLWFVS.....NLVKELLkIQYQEELDRSLDLIFAILHLDIENSTLDLINNV.LPQYLYNSLQgKKLIEPqssalAKLcVYCIFSSLeysNNSPQQTNSRKRAR...KDIDPDDMDIGMPA...AKLLRLNEAIdansmfSSSSP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30248 with Med24 domain of Kingdom Metazoa
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