<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30246

Description Uncharacterized protein
SequenceMGNEAQITSILNEILKVEAIEEAFSCIIVHNPSNEKEKIKGWQSELASVMAGLGTEQQENAIRRFLYIAAEITNYKRMHLVLSLLENLVSTNVLPARLVCECIFGCEKLQYQNKEFWVECFTLIRHIIGGVDYKGVREILKACEEKAHILPVMIDASVQSQMKACEHLIEYIFDRNACLIPCYLIVNELQKFAADKKNWPHWKLAKLISNFIDSFRNVVQMISIIGHSKMLPLVEHSGYGDHLVSPWLLDRNTLQFSLKGLESLPYDPELLKPQTNLLRYVLEQPYSRDMVCSMLKLQKQQNLRCKALEEQLVDLMIRNMEKSENEPTPADDSDGVITNFWPWLHLSSQLIHYVIFQFVSFPSLITAIHDRLAGREWKKARDHLMWVLLQFISGSIQRNPLTTFLPIFKLYDLLYPEKDPLPVPDLTHIKCTHEMALICIWLHLLRKAQTENSNCHRPIPHNLKMHNEFLQHAVTQPNLAMGTDYRIVLLCNAYSTQTANDYFTRSINVLFESIQKVINTSIVHHPTTPLSMSILDSLTVHAKMNLIHNIVQHMMKNAHSKSNMTLPPALVETYSRLLVYTEIEVMGIKSFINQLLPTIFKAHAWGTLYTLLDMFSYRMHHIQPTYRVQILSHLHNLASVPQTNQTQLHLCVESTALRLITGLGSAEVQPHLSRFLSEPKTLISADSEELNRALVLTLARSMHITGTGADTVSGTWCQDLLNTIMQNTPHSWADHTLQCFPPILSEFFQQNSVPKEEKQQIKKAVEEEYRNWASMSNENDIIAHFSVSGSPPLFLCLLWKMIIETDRISPIAYKILERIGARALSAHLRKFCDYIVFEVSSIAADGSYVNKGVDAINDMIWKYNIFTFDRLVLCLALRTLEGNEAQVCFFIIQLLLLKAAEFRNRVAEFVKENSPDHWKQSNWHEKHLAFHRKFPEKFAPEGIMEQASGSPNQYQSFPAYFGNVCLRFLPVLDIVMHRYLEIPQVTKSLEVLLEHLGCLYRFHDRPVTYLYNTLHYYERQLRDKPILKRRLVIAILGSLRETKTPGWALSDAYQRYIARAPDDLAWQPELDYYVRLVQRLVDTIYGTIQFPPTDWRFNEFPNPAAHTLYVTCVELMALPVAPNVVANNLLDVVAKGYTVIPSDEIHSWINCIGIIMSALPECYWSILHERLVQTASSSGLVNWQYDNLSPFQLFNFNLTHNSFFENKYSYMLALAHSIWHHAGVGQMFTMVQFIKEKLQPVINTEEQLIFACHLIGPTLNRFNSERPKCITDLTIMLYEMLEQVNRAQTHLRQMDPICDLFYHIKYMFVGNSMKNEVETIIRRLRPALQMRLRFIAHLNVEEIQSS
Length1346
PositionTail
OrganismNasonia vitripennis (Parasitic wasp)
KingdomMetazoa
Lineage
Aromaticity0.10
Grand average of hydropathy-0.077
Instability index47.07
Isoelectric point6.66
Molecular weight155508.54
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30246
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     140.14|      54|      93|     115|     168|       2
---------------------------------------------------------------------------
  115-  147 (43.77/25.83)	...................................................EFW............VECFTLIRHIIGGVDYKGVREILKACEEKA
  148-  238 (64.62/42.01)	HIL.PVMID.ASVQSQMKACEHLieyifdrnaclipcylivnelqkfaadkKNWphwklaklisnfIDSF...RNVVQMISIIGHSKMLPLVEHSG
  242-  282 (31.74/16.50)	HLVsPWLLDrNTLQFSLKGLESL........................pydpELL............KPQTNLLRYVL...................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     213.68|      71|     458|     778|     856|       3
---------------------------------------------------------------------------
  778-  856 (94.24/99.23)	ENDIIAHFSVSGsPPL..FLCLLWKMIieTDrISPIAYKILERIGaRAlSAHLRK...FCDyIVFEVSSIAADGSYVNKgVDAI
 1245- 1320 (119.44/83.43)	EEQLIFACHLIG.PTLnrFNSERPKCI..TD.LTIMLYEMLEQVN.RA.QTHLRQmdpICD.LFYHIKYMFVGNSMKNE.VETI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.14|      41|     458|     451|     503|       4
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  451-  503 (59.97/55.77)	ENSNCHRpipHNLKMHNEFLQHAVTQPNL..AMGTDyrivllcNAYstQTANDYF
  919-  961 (73.17/38.60)	KQSNWHE...KHLAFHRKFPEKFAPEGIMeqASGSP.......NQY..QSFPAYF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.53|      29|     458|     641|     686|       5
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   73-  101 (47.70/18.77)	TNYKRMHL.....VLSLLENLVSTNVLP..ARLVCE
  643-  678 (38.82/52.17)	TNQTQLHLcvestALRLITGLGSAEVQPhlSRFLSE
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.57|      23|      97|     324|     346|       7
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  324-  346 (46.57/32.77)	ENEPTPADDSDGV.ITN....FWPWLHL
  417-  444 (37.00/24.25)	EKDPLPVPDLTHIkCTHemalICIWLHL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.69|      13|     721|      32|      44|       9
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   32-   44 (25.58/16.68)	PSNEKEKIK........GWQS
  754-  774 (18.12/ 9.64)	PKEEKQQIKkaveeeyrNWAS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30246 with Med23 domain of Kingdom Metazoa
Unable to open file!