<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30245

Description Uncharacterized protein
SequenceMGNESQIVNILNDILKVEAIEEAFSCIIVHNTNNEKAKITGWQTEMTNAMMGLTTEQQENAIRKFLYTSAEITNYRRMHLILTLLEKLVSNNVLPARLVCECILSCDKLKYQNEEFWIKCFTLVRHIIGGVDYKGVRDVLKACREKAHSLPTRLDASVQPQMKALENLVEYIFDRNACLIPSYLIIDELEKNAENKIWPHWQLAKLISNFVTSFRNVVQIVSIIGHSKMLPVVEHTGYGDHSVTPWVLDRNTLQFTLKGNLPYDPELLKPQTDLLRYVLEQPYSRDMVCSMLGLQNKQNTRCAALEEQLVDLVIRTMEKSENEPTPVEGVDGVTTNHWPWLHLSSQIICHVLSQFASFPSFVTAIHEKLAGREWKKSRDHLMWVLLQFISGSIQRKPIAVFFPIFKLYDLLYPEKDPLPVPDLTQSICAHQMACVSIWLHLVKKIHPDHTNFHKLIPYNLKTHHEFLQHMAVQNTPLSMGSDYKIALLCNAYSTSNELFSRPMSVLVESVLGTQKVMLSFSYPTAPLPMSILDSLTVHVKMSLIHSILTHVAKSASTKSNLPLPPALVETYSRLLVYTEIENIGIKKFISHLLPTVFKAHAWGILYTLLDMFSYRMHHIQPTYRVQILSHLHSLASVPQTNQTQLHLCVESTALRLITGLGSAEVQPHLSKFLSEPKTLVSADSEELNRALVLTIARSMHITGTGGDTNRDVNSIWCKDLLNTIMQNTPHSWAEHTLRCFPPALSEFFQQNSIPKEEKQQIKKAVEEEYRNWASMSNENDIIAHFSVPNSAPLFLCLIWKMILETDRVNPIVYKILERIGARALSAHVRKFCDYIVFEVSSTAADGIYVNKSVDAINHMIWKYNIVTFDRLVLCLALRTLEGNEAQVCFFIIQLLLLKATEFRNRVVEFVKENSPDHWKQSNWHEKHLAFHKKFPEKFAPEGMMDQSSGSPNQYQSFPAYFGNVCLRFLPVLDIVMHRYLEVPQVTKSLEVLLDHLGCLYRFHDRPVTYLYNTLHYYERKLRDQHFLKRRLVTAILGSLKEIRAPGWALSEAYQRYTARSTDDVKWQPELDYYVRLVQRLVETISGRAQFPSTDWRFNEFPNPTAHTLYVTCVELMALPVAPNVVANNLLDVVAKGYTIIPSDEIHVWINCIGIIMTALPECYWSTLHDRLVETITSPGLTSWQYDNLSPFQLFNFNLTHNSFLENKYSYMLALAHSIWHHAGVGQITAMTRFVKERIQPVVNNEEQLIFVCHLIGPTLTRMNIERPRCVNDLTEILYEMLEQVNRLQTHLKQMDPVCDLFYHIKYMFVGDAMKNNVDGIIRRLRPALQMRLRFIAHLSIDNIHTGKINNTTNIGQPSNHPSPLPQLHSESKRLGPSSTI
Length1380
PositionTail
OrganismNasonia vitripennis (Parasitic wasp)
KingdomMetazoa
Lineage
Aromaticity0.09
Grand average of hydropathy-0.113
Instability index43.07
Isoelectric point7.49
Molecular weight158624.79
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30245
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     470.34|     162|     466|     624|     833|       1
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   62-  237 (258.93/174.21)	IRKFLYTSAEI..TNYRRMHL.....ILTLLEKLVSNNVLP..ARLVCE..CILSCDklkyqNEEF.WIKCFTLVR..HIIG.GVDYKgvRDVLKA.CREKAHSLPTRLDAS.VQPQMKALENLVEYIFDRNAclIPS......YLIIDELEKN.....AENKIWPHWQLAKLISNFVTSFRNVvqivsIIGHSKMLPVV....EHTG
  627-  820 (211.41/266.15)	ILSHLHSLASVpqTNQTQLHLcvestALRLITGLGSAEVQPhlSKFLSEpkTLVSAD.....SEELnRALVLTIARsmHITGtGGDTN..RDVNSIwCKDLLNTIMQNTPHSwAEHTLRCFPPALSEFFQQNS..IPKeekqqiKKAVEEEYRNwasmsNENDIIAHFSVPNSAPLFLCLIWKM.....ILETDRVNPIVykilERIG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     123.58|      32|      90|    1068|    1100|       2
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 1001- 1047 (37.20/23.21)	RFHD.........rpvtylyNTLHYYERklrdqhfLKRRLVTAILGSlKEIRAPGW
 1048- 1095 (45.64/28.59)	ALSEayqrytarstddvkwqPELDYYVR.......LVQRLVETISGR.AQFPSTDW
 1160- 1183 (40.75/24.35)	....................PE.CYWST.......LHDRLVETITSP.GL...TSW
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.45|      38|     463|     441|     481|       4
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  441-  481 (66.29/43.29)	LVKKIHPDH...TNFHKlipYNLKTHHEFLQHMAVQN.TPLSMGS
  909-  950 (63.16/34.12)	FVKENSPDHwkqSNWHE...KHLAFHKKFPEKFAPEGmMDQSSGS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.52|      19|     134|     240|     265|       6
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  240-  265 (23.77/33.35)	DHSVtpWVLdrntLQFtLKGNLPYDP
  379-  397 (37.75/22.09)	DHLM..WVL....LQF.ISGSIQRKP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.75|      31|     257|     952|     997|      10
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  963-  997 (44.49/61.88)	NVCLRFLpvLDIVMHRYLEVPqvTKSLEVLLDHLG
 1123- 1153 (55.26/30.44)	NVVANNL..LDVVAKGYTIIP..SDEIHVWINCIG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30245 with Med23 domain of Kingdom Metazoa
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