<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30244

Description Uncharacterized protein
SequenceMDISKDEATPATFLKQRVYYDSSEDDSDESYEFLDFSPDSLQPDGSDSNNPALASTKSTDKPVDSKSAKATQTLTMETQSIGTETEWVSTCAETQTELDSSKQSSTAGELQNAANAPVNDKPLTRQLSSLELLEYYAKLLKKRCPATIEFFIRSGLLNRREKSIIDRELKTVEWQIRRKKDQQQLSMGTDTPKYTDAASTDIPRAPSNQANRTEMNRKGSWKGILEWEDKRAETTRFGVPVEVTGVSGIREQEVDCERWPTKLVMNFFPEKLMGVCDMENTKSIELIASPCQALDRMRKAMSNDYAGCVYLPSTSPGVSNLLFLYYAGNGSRFIGLIPHDQRAHEHRLMVGLLQQQTACVVRMTSTVGSLSVGPPSTGTLQNGIPMTPYEPKKIDPITQITIPINRLSMQTHEAAQQQQEVQKESQENSSANETRPSLLGWSFSMNPEDSDTFVKCEICDGYGKDLHHLRNHLLWAHNVKVQTTMIHTPPLYCHRCAYRFFTDKGLERHLLGTHGLVTTNMQECANSGEDAGLCPVNNCRKVHQKKLLDHVRIDHGMILKPAHLLYRCTMCTTTSATYEEFLKHTYSTHPNV
Length592
PositionUnknown
OrganismNasonia vitripennis (Parasitic wasp)
KingdomMetazoa
Lineage
Aromaticity0.07
Grand average of hydropathy-0.614
Instability index39.66
Isoelectric point6.09
Molecular weight66580.35
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30244
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     156.33|      47|     138|      45|      94|       1
---------------------------------------------------------------------------
   45-   94 (71.31/53.66)	GSDSnnPALASTKSTDKPvDSKSAKATQTLTMETQSIGTETEWVSTCAET
  188-  234 (85.03/53.06)	GTDT..PKYTDAASTDIP.RAPSNQANRTEMNRKGSWKGILEWEDKRAET
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.67|      40|      72|     474|     514|       2
---------------------------------------------------------------------------
  474-  514 (73.99/53.90)	LWAHnVKVQTTMIHTPP..LY.CHRCAYRFFTDKGLERHLLGTH
  547-  589 (65.68/42.77)	LLDH.VRIDHGMILKPAhlLYrCTMCTTTSATYEEFLKHTYSTH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30244 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EDDSDESYEFLDFSPDSLQPDGSDSNNPALASTKSTDKPVDSKSAKATQTLTMETQ
2) KDQQQLSMGTDTPKYTDAASTDIPRAPSNQANRTEM
3) TEWVSTCAETQTELDSSKQSSTAGELQNAANAPVNDKPL
4) THEAAQQQQEVQKESQENSSANETRPSLLGW
24
180
85
411
79
215
123
441










Molecular Recognition Features






MoRF SequenceStartStop




1) MDISKDEATPATFLKQRVYYDSSEDDSDESYEFLDFSPDSLQP
1
43