Description | Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MDSEHSWKQLRLSLERPYKDDHGNPIPVVEDITPGPTSDYIYETKDNPSARLGANLRRIFVERGLDFFDRISGDAFISSNSSDNEEVAETKSDEDEHEPKMMKYEDLREMREEILKNLAVSLGEMTQSQQVLAALLATTNNNSSLPSTQSSSQTQPEAHLPSQLQSLPSPNVNFSATLVTQPPSITSVQTFNAQLAIGGKDEALRHAAGLFKASAKSIERTRLAGERYWVDALKIRRSNWGLVPAPLPLGSATGKGADKTSKDFLISFGLEESPTQFRRRAVGRLPSYSEPSQGVVFPHRRNTRLRVSIIKTDPGGMNQVSANILPFDDETILDGALRAAQREIIEQEIFSILVQEAGGLLTASARVSERLIVIDAAQGLELQIELVDKPNIHLHSTEKSETCDLIYYGLHILLLRRHTLLKEDRLKSSAPGPPLPSSADNKPKYPVLQPVIDLLQYRVFIDRIQNEVVQVVRALQVAGIPVHLVMNVVGETSKELLDLLDSTVTLTVGGEIVLRIFDRHTIRFTCVSPSTLVAHLSNSTLTISSAPQLCQLLMDEVEHCLLNSIRDVGKNLTENIEGTWFIDLDHCIGRWEGCVL |
Length | 596 |
Position | Head |
Organism | Agaricus bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392) (White button mushroom) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Agaricomycetidae> Agaricales> Agaricaceae> Agaricus. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.260 |
Instability index | 52.05 |
Isoelectric point | 5.44 |
Molecular weight | 66095.23 |
Publications | PubMed=23045686 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP30147 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 123.28| 39| 455| 27| 97| 1 --------------------------------------------------------------------------- 58- 97 (63.37/78.03) RIFvERGLDFFDRISGDAFIS..SNS....SDNEEVAETKSDEDEH 515- 559 (59.91/22.12) RIF.DRHTIRFTCVSPSTLVAhlSNStltiSSAPQLCQLLMDEVEH --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 89.53| 29| 137| 265| 298| 3 --------------------------------------------------------------------------- 265- 298 (40.15/44.74) LISFGLEesPTQFRRRAV...GRLPSySEPsqGVVFP 405- 436 (49.38/33.06) LIYYGLH..ILLLRRHTLlkeDRLKS.SAP..GPPLP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 56.84| 17| 40| 308| 324| 4 --------------------------------------------------------------------------- 308- 324 (29.99/20.33) SIIKTDPGGMNQVSANI 351- 367 (26.85/17.47) SILVQEAGGLLTASARV --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LRRIFV 2) TSDYIYETKD 3) WKQLRLSLERPYK | 56 37 7 | 61 46 19 |
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