<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30064
Description |
Uncharacterized protein |
Sequence | MVEGDVLLDLDKLPIKRLEAIDEAGNEHYPPDTSNKEQHLAAIRRIDFSWVIEKDAKKAKKAAEADTAQQAWPWQGLMESLQQAQQELSVVIDLIGTVEANDAVAVASTTKPKSQPNEILVDMAVSAATKLQRLRHLSRYFKQSAKTMEQQFQKETRFYNSLIRLQQNWKVKRQRVVGSGPGSEGFMFDLVDSYQLDTTTMPRVSPLSLVPIDQDSSGTLSVQIPQKSFRSLSLQFYGDTANNAESSASKKKEDTLSSSSSETDKDALENDDVNKSVKQAHSILRDIHKSIFEEQVFDMVIRDTFTQSQGINVTGMCEDFLQLAIGQECSLCLLLVPSGQNSDSETVGQEDHMDSEYSGNLAVATVNGKQESLNKDLRGFPNPKSLEIYLLHMFHEKIVRKIREKSRFVVRYQSPAQIAPEECGLLGHFCMTVAHRIFSNKVHLELESVVSRVPYLHLCSLPTWHSRTSSWSLCLKVPQPILAADRITKPSDVHEPRYKSRSQFNTKVILKDGQISLMGEGSPSIAGSLTGKPSDGRLINSYNCDLEDLPMMLLQQVASQVIHWLHEEAMVLGMNVTRDFLCLYFDLDQGETLGLVAHVDPDDAYGCISWYLTVDHPTEEGKMSADNLELEKRRFLGYLSLEVLYSTLMDLIKLCSTGVQH |
Length | 661 |
Position | Head |
Organism | Setaria italica (Foxtail millet) (Panicum italicum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Cenchrinae> Setaria.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.360 |
Instability index | 46.39 |
Isoelectric point | 5.47 |
Molecular weight | 74178.33 |
Publications | PubMed=22580951
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Function
Annotated function |
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GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
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GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
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GO - Biological Process | production of miRNAs involved in gene silencing by miRNA GO:0035196 IEA:EnsemblPlants
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP30064
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 142.27| 46| 139| 330| 381| 1
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331- 380 (75.95/58.77) LCLLLvpsgQNSDSETVGQEDHMDSE..Y...SGNLAV..ATVNGKQESLNKDL..RGF
581- 635 (66.32/33.42) LCLYF....DLDQGETLGLVAHVDPDdaYgciSWYLTVdhPTEEGKMSADNLELekRRF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 82.00| 24| 252| 203| 226| 2
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203- 226 (41.76/27.00) RVSPLSLVPI....DQDSSGTLSVQIPQ
452- 479 (40.23/25.74) RVPYLHLCSLptwhSRTSSWSLCLKVPQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.36| 13| 41| 480| 492| 8
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480- 492 (23.44/14.87) PILAADRITKPSD
523- 535 (23.92/15.32) PSIAGSLTGKPSD
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