<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30039

Description Cyclin-dependent protein
SequenceMTSNPPSSGGGPSVSAQRTQTLKRSVQAAFDDPADHGISPNVGYQSKVRVIDRYKVIGFISSGTYGRVYKAVSRYGQPGEFAIKKFKPDKEGEQIQYTGISQSAVREMALCSELRHINVIRLNETILEDKCIYMVFEYAEHDLLQIIHHHTQPTRHPMVPSALKSIMFQLLNGCQYLHANWVLHRDLKPANIMVTSGGEVKIGDLGLARLFNKPLHSLFSGDKVVVTIWYRAPELLLGSRHYTPAIDMWAIGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMQKIVEIMGIPTKEKWPHLVNMPEYNQLSTLSSSNSRSGSNLEKWYYSTINAHAPTSVPSNASLGAEGYKLLSGLLEYDPERRLTAQQALQHPFFTTGEKVSSNCFEGVKAEYPHRRVSQDDNDIRTSSLPGTKRSGLPDDTRPMKRLKE
Length434
PositionKinase
OrganismMarssonina brunnea f. sp. multigermtubi (strain MB_m1) (Marssonina leaf spot fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes> Helotiales> Dermateaceae> Marssonina.
Aromaticity0.08
Grand average of hydropathy-0.445
Instability index39.49
Isoelectric point9.18
Molecular weight48764.15
Publications
PubMed=22876864

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30039
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.12|      29|      96|     293|     323|       1
---------------------------------------------------------------------------
  293-  323 (48.31/36.39)	GIptKEKWPHLVNMPEYNQLSTLS.SSNSRSG
  392-  421 (47.82/29.16)	GV..KAEYPHRRVSQDDNDIRTSSlPGTKRSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.03|      14|      26|       4|      17|       5
---------------------------------------------------------------------------
    4-   17 (26.53/19.43)	NPPSSGGGPSVSAQ
   32-   45 (27.50/20.46)	DPADHGISPNVGYQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30039 with CDK8 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MTSNPPSSGGGPSVSAQRTQTLKRSVQAAF
2) VKAEYPHRRVSQDDNDIRTSSLPGTKRSGLPDDTRPMKRLKE
1
393
30
434










Molecular Recognition Features






MoRF SequenceStartStop




NANANA