<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP30014

Description Uncharacterized protein
SequenceMPPRQYLSHGVRTSHPTHSSKTTTRRRSNGAHTTDPGPLADPVPIEEFPPPAWRTVLNSRADLGYPDFYPSRPGYGQPEDELPESFVKSGFSSKAAVNVTAESFSMHGPVFQQLQSGGLEKLMELGQQIIEQRNASMPTFSERVFRIPVRVTYNDAKRLQFLAELANPAIPLTRLMRTPVPHGFKGVDLLETMFCPPQPTVRPTPGAAAQGPKPPSDPIPIDRALWFIRVLGANEITTHRGRAQPATVGVQAPSPVAATPSSTATAPPSAAPLNSNDWYTGEFTNAFTAWLRIQLGQLVLPARPAKAGAPPPPKAPAGVLGDEKSKARWLAKWQYSNQLLHQLYRKRLISPRLLVQWLSDFLGTANLAQLGFVSQLIHDNLVDVAEYVVVGRHCVRAACAKIDEIRASPARATMSKVEQLLINIVQVLYDSNPEVILSPATWTRHSARLSELLDSTTPTFQDLTRRNEALVAVPPVVDAGASPRRQQMVEVNKLDSIAAETDMAALCKSYFNGACAPTSPKIDLAKLEEKVFILVNWAMGLYQLGIHRPYAVYTLLKKWQEWHEEQRSEPFDFFDILYKWLDTSAAAQRPDNVLAIGIAFGEMTRQGMFSYGRYIRKLIAVGHSARNHTGPPSHHLELLRAMPIFVESKELCVQRRLILSGDSDPRERERGQAEEDAALESFKQELKEYVPEIFGLKRYGRSATFKEQIDYQLPSAASLNRYEFVQTRFWMFAAAVNAFKRQGPQPAMSASTFARIINVFNQCWAYSTTTDGIVGTEDEEILLIILDAIKRHADVWTCIDRWNEITTALMERFRVMQRKGRFFPPLAAVLLMLAQHNRVPPNAEEEVRAASEAHRHKSPATPAFPVDLDQSLQGLKQIIMSGDAAKASALSSKMFTRHGKFSAWSEKWWAAIIEAVQSADNSKADAVMAAVAHICEVEDVAGDGSLRPVVAAWLDTLVVATRLEVFGRRNVPPVVRLLLQLVVNRRLGSAVLLERLVFPELKHAATLASAAHPRLGTKRTHAIDWAVTMTQQLLLCTAHKTLPPQNLREAYIVQTARAAVFHASKVEGLISHLPVLVVLERSKVVPEKIRTQIGEIFRGLAALPQFKTAAFRNLDGLKDSFLSNDWIKRTSDSSLETGMVEGLKLMMSDSTTRDKSSTSLAIERGARYSAWRWTRVVLEMRVEFKRLTMRITNNDEPVEARQQIARIVRSSLDREASPDDMDLLVEAFRGADSVVAQEILSVGLDRLSVLLSQLLSAENQHQVEDTAAAVDQVLRVIRSAGRQERLEVATAAARDRLFNLLTVAFQSIERQVTSEDDVQLLPGAKPAEPGSVLQVVFKLLRFALALPSQDTIVTAAPRPDYAQLDTAFLHLAVEVFTDLDTMRDLLIYLVDSTPTSSQAAVYQALSYEMSTSAVQDLLTAHPSFASALPRPPPTFRAMALSGSHVAESEGIALDDRPWEMMEHLTPLETPSHVDVFLSSKPLKDTASIPIALFRPQLTRDEVPVLSTSPEPWDYASSERNLGNGAAGEPVSARQMATILYAPAPAEEEPKLAPAAPKRARNATPVSVKGTGTTTDPIDILESSEEDEPLQKKPRTAAAAGKTTRASTADKAPRKAAPAKKAPAKAPAKAPAKTTAAKSKTTATAKRRRSGGAE
Length1653
PositionKinase
OrganismTrichosporon asahii var. asahii (strain CBS 8904) (Yeast)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Tremellomycetes> Trichosporonales> Trichosporonaceae> Trichosporon.
Aromaticity0.07
Grand average of hydropathy-0.232
Instability index49.69
Isoelectric point8.86
Molecular weight182209.21
Publications
PubMed=23193141

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP30014
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.35|      20|      36|    1588|    1610|       1
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 1588- 1609 (29.88/14.08)	PLQKKPRTAAAAGKTTraSTAD
 1626- 1645 (29.48/ 8.68)	PAKAPAKTTAAKSKTT..ATAK
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.94|      15|      23|     948|     969|       2
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  948-  963 (22.82/29.66)	PVVAAWLDtLVVATRL
  973-  987 (26.12/10.13)	PVVRLLLQ.LVVNRRL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     155.16|      40|     264|     873|     914|       3
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  873-  914 (66.46/46.03)	QGLKQIIMSGDAAKASALSSKMFTRHGKFSAWseKWWAAIIE
 1115- 1134 (22.39/ 8.08)	DGLKDSFLSNDWIKRTSDSS......................
 1141- 1179 (66.32/40.16)	EGLK.LMMSDSTTRDKSSTSLAIERGARYSAW..RWTRVVLE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.84|      28|      36|     313|     341|       4
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  313-  341 (45.06/44.68)	PKAPAGVLGDEKSKARwLAKWQYSNQLLH
  351-  378 (48.77/40.10)	PRLLVQWLSDFLGTAN.LAQLGFVSQLIH
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     261.48|      63|      63|    1288|    1350|       5
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 1180- 1229 (49.93/24.90)	......MRVEFKRLTMRITNND.............EPVEARQQIARIV.................RSSLdreASPdDMD...LLVEAFR
 1245- 1294 (60.27/31.66)	DRLSVLLS.QLLSAENQHQVEDTA.................AAVDQVL.................RVIR...SAG.RQErleVATAAAR
 1295- 1358 (97.43/55.95)	DRLFNLLTVAFQSIERQVTSEDDV..QLLPGAKPAEPGSVLQVVFKLL.................RFAL...ALP.SQD..tIVTAAPR
 1359- 1429 (53.85/27.47)	PD.YAQLDTAFLHLAVEVFTDLDTmrDLLIYLVDSTPTSSQAAVYQALsyemstsavqdlltahpSFAS...ALP..............
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     216.09|      64|     202|     575|     641|       6
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  575-  641 (109.40/71.84)	DILYKWLDtsaAAQRPDNVLAIGIAFGEMTRQGMFSY......GRYIRKLIAVGHSARNHTGPPSHHLELLRA
  780-  849 (106.68/63.38)	EILLIILD...AIKRHADVWTCIDRWNEITTALMERFrvmqrkGRFFPPLAAVLLMLAQHNRVPPNAEEEVRA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.21|      14|      72|     407|     420|       7
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  407-  420 (24.72/14.65)	ASPARATMSKVEQL
  481-  494 (24.49/14.44)	ASPRRQQMVEVNKL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     179.68|      39|      44|    1492|    1530|       8
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 1456- 1490 (53.57/25.48)	..RPWEMMEHLTPLET.PSHVDVFLSSKPLKD.TASIPI
 1492- 1530 (65.51/32.88)	LFRPQLTRDEVPVLSTSPEPWDYASSERNLGNGAAGEPV
 1539- 1577 (60.59/29.83)	LYAPAPAEEEPKLAPAAPKRARNATPVSVKGTGTTTDPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     123.47|      38|     257|     426|     465|       9
---------------------------------------------------------------------------
  426-  465 (57.52/45.32)	QVLYDSNPEvILSPATWTRhSARLSELLDSTTPTFQDLTR
  684-  721 (65.95/42.01)	QELKEYVPE.IFGLKRYGR.SATFKEQIDYQLPSAASLNR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     119.10|      26|      43|     243|     268|      10
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  198-  218 (33.82/12.10)	.QP.TV...RPTPG.AAAQGPKPPSDP
  243-  268 (46.01/19.19)	AQPATVGVQAPSPV.AATPSSTATAPP
  286-  312 (39.27/15.27)	AFTAWLRIQLGQLVlPARPAKAGAPPP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP30014 with Med12 domain of Kingdom Fungi
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