<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP29920

Description Uncharacterized protein
SequenceMVLGPLDHSVQTDIIFVIEKTAMNTYISELKTNYVTPTLEYFNQGPIEERDYLSESSSAIYGIVVYEANDCKPYPCCRTYGTFTSPQKVIKMIEKIDMIGGMAESHAYMGEGLATALVFFEDLQEIREAKQRHCILICNSPPYNFPIMECETYAGRGVDQIANLFQEKGILLSILSARKTPALLKLFEKAGGDLQISQNKNYAKDPRHLVLLNGYSLKERPMSPTPATTHSGLSMTSPLSTNVNIGSPVAPCAPFRTTNPVMAMQNQQQQQQQQQHQQQQAAQIAQQAVAVAAQQQQQQQQQQQQQQQVQQQQQQQQQMIRNVNQGQNQQYSNVSNTGGFLRPSQTPRNWPMMQNQQRQPIQASALIAQLTTPTFQQRLDMASQQQVQQQQQQQVQQQQQQQQVQQQQQQVKQQQQVQQQQQQAQQLQQAQQQQQAQQQAQQQQAQQQQAQQQQAQQQQQAQQQHQAQQQHQAQQQQQHQQQQQQQAALRIMNQQQQQVQQQQQQQNGPGRQTIWSGTLEWIEKSKPLNEIPKITRNVPCIVSASIKNGEPELKAETWPDKLIMQLMPKNLIGSIGGAHLKDSKSVVFQPTPCEALESLTKYMTSGYAGCVHFNSAPTSHNCDVKVLILLYTHDRKAFIGFIPNDQAAFVDRLRKLIQHQKASSAILRQGQGGMGMPQGNMPGQLQLPPGPNMPGGPGPNQMPGLMPNSALTASLQSQPQPNLAELMGSNNFAPQSNQVVPNSPSVQMMPSPQPTGQPVNVNNPNMPLQSPGGVGNVGVRPSQGQYSEQIEMARKQNLAKIQQLRQTLELAQQQELQYKSQMEIQSNQMNIPQMQQCLEQAQMQENILKSQLEIRNQMNVPQMQQNLEHAQMQETILKAQLEHQQEEQHKLRTQQFHIHQQQQQQQQQQQQQQQQQQQSRQMVPGNQSPQIMGNSAPQQRMQMRPVMSSNPGLRHLLQQQPQYRQQMMGMQQVPIAQGRPLQPQQQQQQYNDEVHTFDFLN
Length1001
PositionUnknown
OrganismAcyrthosiphon pisum (Pea aphid)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Paraneoptera> Hemiptera> Sternorrhyncha> Aphidomorpha> Aphidoidea> Aphididae> Macrosiphini> Acyrthosiphon.
Aromaticity0.04
Grand average of hydropathy-0.911
Instability index72.79
Isoelectric point8.73
Molecular weight113659.56
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP29920
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     223.00|      27|      28|     418|     444|       1
---------------------------------------------------------------------------
  282-  316 (43.04/ 6.46)	AQIaQQAvavaaqQQQQQQQQQQQQQQvQQQQQQQ
  377-  401 (43.55/ 6.64)	QRL.DMA......SQQQ.VQQQQQQQV.QQQQQQ.
  402-  424 (41.89/ 6.06)	QQV.QQ........QQQQVKQQ.Q..QvQQQQQQA
  425-  450 (49.70/ 8.82)	QQL.QQA......QQQQQAQQQAQQQQaQ..QQQA
  897-  919 (44.83/ 7.09)	.HI..........HQQQQQQQQQQQQQ.QQQQQQS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     147.36|      27|      27|     827|     853|       2
---------------------------------------------------------------------------
  794-  823 (39.42/15.00)	RKQNLAKIQQLrqtLELAQQQELQYKSQME
  827-  853 (55.09/24.40)	NQMNIPQMQQC...LEQAQMQENILKSQLE
  856-  882 (52.84/23.05)	NQMNVPQMQQN...LEHAQMQETILKAQLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.44|      18|      19|     691|     708|       4
---------------------------------------------------------------------------
  693-  714 (33.63/12.66)	MPGGPGPNQMPGLMPNsaltAS
  715-  730 (23.13/ 6.13)	LQSQPQPN.LAELMG.....SN
  749-  765 (31.68/11.45)	MP.SPQPTGQPVNVNN....PN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.67|      25|      26|     937|     962|       6
---------------------------------------------------------------------------
  325-  345 (33.75/ 7.31)	Q.GQNQ.QYS..NVSNTGGFLRP....SQ
  937-  961 (36.34/11.04)	..PQQRMQMR..PVMSSNPGLRHlLQQQP
  962-  988 (37.58/ 8.99)	QyRQQMMGMQqvPIAQGRP.LQP.QQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     103.57|      26|      26|     568|     593|       8
---------------------------------------------------------------------------
  568-  591 (35.53/18.84)	..............PKNLI.GSIGG.............AHLKDSKSVVFQPT
  592-  618 (24.55/10.48)	PC......ealeslTKYMTsGYAGC.............VHFNSA......PT
  621-  671 (22.12/ 8.63)	NCdvkvlillythdRKAFI.GFIPNdqaafvdrlrkliQHQKASSAILRQGQ
  672-  690 (21.37/ 8.06)	GG.........mgmPQ....GNMPG....................QLQLPPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     145.43|      45|     490|      38|      90|      14
---------------------------------------------------------------------------
   38-   90 (70.82/66.46)	TLEYFNQG.PIEErdyLSESSSAIYGIVVYEANDCKPYPCCRTYgtftsPQKVI
  518-  563 (74.61/48.82)	TLEWIEKSkPLNE...IPKITRNVPCIVSASIKNGEPELKAETW.....PDKLI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP29920 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LKSQLEIRNQMNVPQMQQNLEHAQMQETILKAQLEHQQEEQHKLRTQQFHIHQQQQQQQQQQQQQQQQQQQSRQMVPGNQSPQIMGNSAPQQRMQMRPVMSSNPGLRHLLQQQPQYRQQMMGMQQVPIAQGRPLQPQQQQQQYNDEVHTFDFLN
2) NGYSLKERPMSPTPATTHSGLSMTSPLSTNVNIGSPVAPCAPFRTTNPVMAMQNQQQQQQQQQHQQQQAAQIAQ
3) QKASSAILRQGQGGMGMPQGNMPGQLQLPPGPNMPGGPGPNQMPGLMPNSALTASLQSQPQPNLAELMGSNNFAPQSNQVVPNSPSVQMMPSPQPTGQPVNVNNPNMPLQSPGGVGNVGVRPSQGQYSEQIEMARKQNL
4) QQQQQQMIRNVNQGQNQQYSNVSNTGGFLRPSQTPRNWPMMQNQQRQPIQASALIAQLTTPTF
848
213
660
313
1001
286
798
375










Molecular Recognition Features






MoRF SequenceStartStop




NANANA